Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq157 96.9 3e-15 >seq157 Length=512728 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/155 (75%), Gaps = 6/155 (4%) Strand=Plus/Minus Query 20521 GTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||| |||| | || |||||||||||||| |||||||| || |||||||||| |||||| Sbjct 347324 GTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCC 347265 Query 20581 CTC--CCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCC 20638 ||| || ||| || | | ||| | | ||||||| || | ||| || || ||| Sbjct 347264 CTCCTCCCTCTCTGTG--AAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATCC 347207 Query 20639 CATATCTTGACTCCTGTTCT-TGAAAGCTCCCTGG 20672 || ||||| |||||| |||| ||| |||||| ||| Sbjct 347206 CAGATCTTCACTCCT-TTCTCTGACAGCTCCTTGG 347173 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || |||| || |||| ||| || || | || | |||||||| ||||| ||||| Sbjct 348227 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 348168 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||||||||| | || | ||| ||||||||||| || ||||| ||||| Sbjct 348167 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTCGCAG 348108 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || || || ||||| | ||| ||||| || |||||||| Sbjct 348107 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCAT 348067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441272911818200