Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq6293 89.7 4e-13 seq2594 89.7 4e-13 >seq6293 Length=8452 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 115587 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 8332 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 8273 Query 115588 CAAAACTGATATATTGAGCCATTCG 115612 || ||||||| || ||||||||||| Sbjct 8272 CATAACTGATTTAATGAGCCATTCG 8248 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 114390 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 8332 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 8273 Query 114391 CAAAACTGATATATTGAGCCATTCG 114415 || ||||||| || ||||||||||| Sbjct 8272 CATAACTGATTTAATGAGCCATTCG 8248 >seq2594 Length=100498 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 114390 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 41734 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 41793 Query 114391 CAAAACTGATATATTGAGCCATTCG 114415 || ||||||| || ||||||||||| Sbjct 41794 CATAACTGATTTAATGAGCCATTCG 41818 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 115587 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 41734 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 41793 Query 115588 CAAAACTGATATATTGAGCCATTCG 115612 || ||||||| || ||||||||||| Sbjct 41794 CATAACTGATTTAATGAGCCATTCG 41818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396974786320210