Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq406 178 2e-39
seq120 91.5 2e-13
seq541 84.2 3e-11
>seq406
Length=364117
Score = 178 bits (196), Expect = 2e-39
Identities = 890/1391 (64%), Gaps = 44/1391 (3%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| |||||||||||
Sbjct 267852 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 267793
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| ||||||||||| |||| || |||||||| | | || | || || |||
Sbjct 267792 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 267733
Query 114062 TTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 114118
|| || | |||||| | || | | ||||| | || ||||| || |||||
Sbjct 267732 TTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGTGTCTTCTCC---CACATGTCGTACTGG 267676
Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178
||||| || | | | ||||| ||||| | |||||||| ||||| | | ||
Sbjct 267675 AGGATGCCCTTGCTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCG 267616
Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238
| |||| |||| ||||| ||||| ||||| || || ||||| || || | || |
Sbjct 267615 AGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGC 267556
Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 114298
|| ||| ||| | || |||| |||| || || || |||| || |||||
Sbjct 267555 AGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCC 267496
Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACGGG 114357
||||| |||| || || || | || | | | || ||| | ||| || || ||
Sbjct 267495 TGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCG-GCTTCGGGGACCGG 267437
Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417
|| |||| | ||||| | | | || || ||||| || ||||| ||||
Sbjct 267436 GTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGC 267377
Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477
||||| | | | || ||| | || |||| |||| ||| | |||||||| ||
Sbjct 267376 CAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCGATGGA 267320
Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537
||||| || || || | ||| ||||| |||||||| | | || || || |
Sbjct 267319 GGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAG 267260
Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597
|| | || |||||||||| ||||| || || ||| |||| || || |||||
Sbjct 267259 GTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTT 267200
Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT- 114656
||| |||||||| |||||||| || || || ||||||| || || || | ||||| |
Sbjct 267199 GTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGCTG 267140
Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716
| ||| || || | || | | ||| |||| ||| || | |||||||| |
Sbjct 267139 CTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCT 267081
Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGAC 114775
| ||||| || ||| | ||| ||||| || || ||||| || | | |||
Sbjct 267080 CGAACTCCTCTCCCCAGCACTCGTCCAGCCCAGGACACTCG-CTGGGACACATCAAGGAC 267022
Query 114776 CATTGACCACCCTCCT--CAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGA 114833
|| | || | || | || | ||||||||| ||||| |||||||| | || |||
Sbjct 267021 CAGT--CCTGGTTGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGA 266964
Query 114834 AGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 114892
| || || | | | ||| || | | || || || || ||||| |||||
Sbjct 266963 AAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGAAGTCG 266905
Query 114893 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACC 114948
| | || |||||||||||||||||||| || | | ||| || | | ||
Sbjct 266904 AACACGTCGAAGTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTG-CC 266846
Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008
|||||| || || | || ||| || | || | ||||| || | | || |
Sbjct 266845 GCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTT 266786
Query 115009 AGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGC--TCTGA--CA--TCATGGAT 115062
|| | ||| || || || ||| || ||| | | || || || ||| |
Sbjct 266785 GGAGTTGCCGTTGGTGCCGGCAATGT-AG-CTTCCCGTCGATCGGATGCAGCTCACCGC- 266729
Query 115063 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTA 115122
|| || || ||||| || |||| || || ||||||||| | | || || ||||
Sbjct 266728 ---CACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTA 266672
Query 115123 GATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT 115182
||| || ||||| ||| |||| | || | ||||||||||| |||| || ||||
Sbjct 266671 GATGCCTTCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCC- 266613
Query 115183 TGGT--GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 115239
||| || || |||||||||||||| || | |||||| ||||| || | | ||||
Sbjct 266612 -GGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAG 266555
Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299
| ||||||||| | | | ||| ||||||| |||||| || || | ||| ||||
Sbjct 266554 GAGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCT 266495
Query 115300 CATAAACATGT 115310
||| | |||||
Sbjct 266494 CATGAGCATGT 266484
>seq120
Length=551038
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
||||||| | | |||||||| || ||| || || ||||||||||| || | |||||
Sbjct 520407 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 520348
Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185
||| |||| | || ||| ||||| || ||||||||||| |||||||| ||||| |
Sbjct 520347 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 520288
Query 126186 CAAAGAGACGCTC 126198
| | ||||||||
Sbjct 520287 CCACAAGACGCTC 520275
>seq541
Length=321934
Score = 84.2 bits (92), Expect = 3e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 113948 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTG 114007
||| | ||||| | ||||| | ||||||||||||||| ||| ||||| ||||| ||||||
Sbjct 159241 TTGCTTGTGTACGCCTCAATGGACTCATTGTTACCCAGGATCTGGGCAGTGGAAGCTGTG 159300
Query 114008 GGCATGGGTGCCATGAGAAGGCTGTT 114033
||||| || |||| || || |||||
Sbjct 159301 GGCATCGGGGCCAAAAGCAGACTGTT 159326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597218411413400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |