Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq406 275 6e-69
seq619 96.9 3e-15
seq541 86.0 6e-12
>seq406
Length=364117
Score = 275 bits (304), Expect = 6e-69
Identities = 955/1462 (65%), Gaps = 40/1462 (3%)
Strand=Plus/Minus
Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134
||||| ||| | | || | ||| ||||| ||||| || || || || |||| || ||
Sbjct 267846 TTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTG 267787
Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAAC 153194
|||||| ||||| || || |||| || |||||| || | ||||||| |
Sbjct 267786 GGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGC 267727
Query 153195 GCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT 153254
|| ||| |||||||| | | ||||||| | ||||||||||||||| | | ||
Sbjct 267726 AGCTTCCAGTCCCACAGGTCGGTCGGTGTCTTCTCCCACATGTCGTACTGGAGGATGCCC 267667
Query 153255 CGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAGTTCGCA 153313
||| ||| ||| | |||| |||| |||| || || ||| ||||||||
Sbjct 267666 TTGCTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGA-GCTCTGCGGCGAGTTCGCA 267608
Query 153314 GCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGC 153373
||| ||||| || ||| | | ||| ||||| ||| ||| || | ||||| | ||
Sbjct 267607 GCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGC 267548
Query 153374 TTCTTCGCTCTCGTACGGCATG-CGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432
||| ||| ||| |||| ||| |||| ||| | ||||| |||||||||||||||| |
Sbjct 267547 TTCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGC 267489
Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGA 153491
||| ||||| || | || || |||| || |||| || | | || |||| |
Sbjct 267488 CGATCCCGATCGGCCTGTGGCGCTTGTTG-GACGTCTCGGCTTCGGGGACCGGGTAGTAA 267430
Query 153492 TTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTC 153551
||| ||||| || ||||||||||| ||| | || || || | | || |||
Sbjct 267429 TTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTC 267370
Query 153552 TCGAAATCATAGGTCATTTC-GTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAG 153610
| ||| || | ||| || | || |||| ||| || | ||| || || |||||
Sbjct 267369 TTGAAGTCGAAAGTCCGCTCTGGCGTGACGTA--CAT--GTTGAGGGCGATGGAGGCCAG 267314
Query 153611 ATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCT 153670
|| ||||||||| ||| || | | |||||| ||| | ||| | ||||||||||||
Sbjct 267313 GTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCT 267254
Query 153671 GCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAG 153730
|||||| ||| ||||| || ||||| ||||| || | ||||| ||||| ||| ||||
Sbjct 267253 GCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAG 267194
Query 153731 CATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCG 153789
|||||| || ||||| ||| || | |||| ||| | || || | |||||
Sbjct 267193 CATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGAT-GGCGTACCAGAGCTGCTGCG 267135
Query 153790 C--TC-GCACCCGCTGCCGATAGCGGCCC-TCGCTCTCGTATCGCTCGTACAGTCGCTCA 153845
| || ||||| || | | | ||| || |||| |||| ||| || |||
Sbjct 267134 CCTTCACCACCCTCTTC----ACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCG 267079
Query 153846 AACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACT-GATGCGGACACATCAGCGACCA 153904
||||| || || |||| ||| | || || ||||||| | || |||||||||| |||||
Sbjct 267078 AACTCCTCTCCCCAGCACTCGTCCAGCCCAGGACACTCGCTG-GGACACATCAAGGACCA 267020
Query 153905 CATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAG 153964
| || | | || | ||||||||| ||||| | ||| | ||||| | ||
Sbjct 267019 GTCCTGGTTGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAG 266960
Query 153965 GTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAG 154022
||| | || | ||| |||||| || |||| ||||| | || | | |
Sbjct 266959 GTCTCTGGCTCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAAC 266902
Query 154023 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCCGCCC 154079
| |||| |||||| ||||| | ||| | ||| | ||| || | | || ||||||
Sbjct 266901 ACGTCGAAGTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTGCCGCCC 266842
Query 154080 TGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG 154139
|| ||||||| ||| || | |||||| | || | || ||| || ||| ||| | | |
Sbjct 266841 TGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAG 266782
Query 154140 GTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195
|||||||||| || ||| | ||| | | || | ||| | ||| ||
Sbjct 266781 TTGCCGTTGGTGCCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCT----CACCGCCAC 266726
Query 154196 GCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCC 154255
||| || || || || |||| || ||| ||||| | ||| || |||||||||
Sbjct 266725 GCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCC 266666
Query 154256 GTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGT 154315
|||||||| ||||| | | | |||| ||| || ||| ||||| | ||
Sbjct 266665 TTCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGT 266606
Query 154316 TCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTA 154375
|| || |||||||| ||| ||||| || ||| || | || | | |||
Sbjct 266605 CCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTA 266546
Query 154376 CGTTTCGATGGCGTCTTCGATATCATCG-CCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434
|| |||||||| | || || || ||| ||||| || || | || || | ||||||||
Sbjct 266545 GGTCTCGATGGCAGCGTCAATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGCA 266487
Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494
|||||||||| || ||||| ||| | || ||||||| || || || || |
Sbjct 266486 TGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAG 266427
Query 154495 TTTTGTAACCGAAATACTTGTA 154516
| ||| ||||||| | |||||
Sbjct 266426 TCTTGAAACCGAAGAAGTTGTA 266405
>seq619
Length=304156
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || || || || || || ||||| || | |
Sbjct 191783 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCA 191724
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || | ||| ||||| ||||| || |||||||| || ||| | |||| || |
Sbjct 191723 AAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC-TGAATCTTTGCCTTCAC 191665
Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
| || | |||||| | | ||||||||| | || | || || ||||| ||||||||
Sbjct 191664 GTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTCCCAGTGAGAGTTTT 191605
Query 138600 TACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 191604 CACGAAAATCTGCAT 191590
>seq541
Length=321934
Score = 86.0 bits (94), Expect = 6e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699
|||| | |||||||| | |||||| |||||| | || ||| ||||| ||||||||| |
Sbjct 160847 TGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGT 160906
Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739
|| | || | ||||| ||||| ||| |||||||||||||
Sbjct 160907 TGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGG 160946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496150089615600
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