Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq768 89.7 6e-13
seq406 89.7 6e-13
seq120 82.4 9e-11
>seq768
Length=308456
Score = 89.7 bits (98), Expect = 6e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263
|| ||||| ||||||||||||||||| ||| ||| || | ||||| |||||| ||||
Sbjct 127855 GTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGGC 127914
Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312
|| ||||| || || |||| ||||||||| ||| ||| |||||||
Sbjct 127915 CTGATGCCTGGCCTGACCTTCAGCAACGAGCTCATCAGTCGAGACGAGG 127963
>seq406
Length=364117
Score = 89.7 bits (98), Expect = 6e-13
Identities = 937/1497 (63%), Gaps = 54/1497 (4%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||| |||| || | || ||||| ||| ||| ||||| |||
Sbjct 266477 CCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATTGACGCTGCC 266536
Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || |||| | || ||||| |||||| | || ||||||||
Sbjct 266537 ATCGAGACCTACAACCTCCTGTCGGAGAAGTG-GTTCACCCACGCCTCTCCGACCCTCTT 266595
Query 111731 CAACGCTGGTAC--ACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788
|||||| || || ||| | || || ||||||| || ||||| |||| | |||||
Sbjct 266596 CAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTTGCCATGAAGGAC 266653
Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848
|| ||| | ||||| |||| ||| || | | || || | || || |||| |||
Sbjct 266654 GACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCT 266713
Query 111849 GGTGGTATCGGGATGCACATCCATGA--TG--TCAGA--GCCAACAAGTCTCGTATTAGA 111902
|| || ||||| || | ||| || || || | | ||| || |||
Sbjct 266714 GGGGGGATCGGCGTG----GCGGTGAGCTGCATCCGATCGACGGGAAG-CT-ACATTGCC 266767
Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962
|| || || || | || | || | | || ||||| | || | ||| ||| ||
Sbjct 266768 GGCACCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCT 266827
Query 111963 CGCTATGTAAACCAAGCTGGGCGTC-GCAAG------GGATCTATCGCAGTCTATCTTGA 112015
||||| || |||| ||||| | |||| || | | || | || || ||
Sbjct 266828 CGCTACGTCGACCA----GGGCGGCAACAAGAGACCCGGGGCCTTTGCCATGTACCTGGA 266883
Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075
|| |||||| || | | || ||||| ||| || ||| ||| | |||||
Sbjct 266884 ACCGTGGCACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGA 266943
Query 112076 GGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135
| | | | | || || |||| ||| | ||||| || || || ||||||||||||||
Sbjct 266944 GCAGAGAGCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAGAGT 267003
Query 112136 TG--AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA- 112192
| || | || | ||||| | | ||||| | || || || || |||
Sbjct 267004 GGAAAGCAACCAGG--ACTGGTCCTTGATGTGTCCCAGCGAGTGTCCTGGGCTGGACGAG 267061
Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252
||| | ||| |||||||| || |||||||| | || ||| | ||| | ||| ||
Sbjct 267062 TGCTG-GGGAGAGGAGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAGGGTGAA 267120
Query 112253 TGCGACGGTGCCAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311
| |||| || || | | | ||| | || || || |||| || ||||| || |
Sbjct 267121 GAGGGTGGTG-AAGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAAACCG 267179
Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371
| || || || ||||| ||||| ||||| || ||| ||||| || || |||| |||
Sbjct 267180 GGACGCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAACCTGG 267239
Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431
| ||||| | ||||||||| ||||| | |||| | || ||| || |||
Sbjct 267240 GCACCATCAAATGCAGCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGACGAGG 267299
Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 112491
||| || || ||||| || || ||||| ||| || ||| || |||||| ||
Sbjct 267300 TGGCCGTCTGCAACCTGGCCTCCATCGCCCTCAACATGTACGTCACGCCAGAG---CGGA 267356
Query 112492 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551
| || || | | || || | || || || || |||||||| ||||
Sbjct 267357 CTTTCGACTTCAAGAAGCTGGCCTCCGTCACCAAGGTAATCGTGAAAAACCTCAACAAGA 267416
Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611
| || || | |||| ||||| || || | || || | | | ||| | |
Sbjct 267417 TCATCGACATCAATTACTACCCGGTCCCCGAAGCCGAGACGTCCAACAAGCGCCACAGGC 267476
Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 112671
| || || |||| ||||| ||||| || |||| ||||| || || || | || |
Sbjct 267477 CGATCGGGATCGGCGTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACATCCGTTCG 267536
Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731
| | |||||| || |||| | || || ||||| || || |||||||| |
Sbjct 267537 AAAGCCCCGAAGCCCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCACGCCGCCC 267596
Query 112732 TTGAGGCGAG-TTCGGAGTTG--GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 112788
| ||||| || | || | | | |||||| | || || || || || | ||||| |
Sbjct 267597 TGGAGGCCAGCTGCGAACTCGCCGCAGAGCT---CGGCCCCTACGAGACGTACGAGGGCT 267653
Query 112789 CTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTC 112845
| || | ||| |||||| | || || | || ||||||| || || ||| | | |
Sbjct 267654 CGCC--CATCAGCAAGGGCATCCTCCAGTACGACATGTGGG-AGAAGACACCGACCGACC 267710
Query 112846 ACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904
| |||| ||| ||| || ||||| ||| | | || | | ||||| ||
Sbjct 267711 TGTGGGACT-GGAAGCTGCTGAAGGAGAAGATCGCCAAACACGGCGTGAGGAACAGCCTG 267769
Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964
|| |||| || ||||| || || |||||||| || ||| |||| || || || | | |
Sbjct 267770 CTGCTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATC 267829
Query 112965 GAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 113024
|| | ||||| | |||||||| | || || | |||||||| ||| |||
Sbjct 267830 GAGGCGTACACCAGCAACATCTACACCCGCAGGGTGCTGTCCGGAGAGTTCCAGATCGTC 267889
Query 113025 AACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081
||| || ||| | | ||||| | ||| ||| || ||| | |||| ||||||
Sbjct 267890 AACCCTCACCTCCTCAAGGACCTGACGGAGCGTGGCCTGTGGAACGAGGAGATGAAG 267946
>seq120
Length=551038
Score = 82.4 bits (90), Expect = 9e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263
|| ||||| ||||||||||| || || ||| ||||| || ||||| |||||| ||||
Sbjct 520299 GTGGAGGGGATCTTCTTCTCAGGCTCATTCGCTGCTATCTACTGGCTGAAGAAGAGAGGC 520358
Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298
||||||||||| || || ||||||||| || ||
Sbjct 520359 CTCATGCCAGGCCTTACCTACTCCAACGAACTCAT 520393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620601918235600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |