Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq406 150 2e-31
seq541 91.5 2e-13
seq120 91.5 2e-13
>seq406
Length=364117
Score = 150 bits (166), Expect = 2e-31
Identities = 524/808 (65%), Gaps = 11/808 (1%)
Strand=Plus/Minus
Query 105841 CTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGAC 105900
|||||| |||| | ||| || ||| || | | || || |||| ||| || ||||||
Sbjct 267946 CTTCATCTCCTCGTTCCACAGGCCACGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGAC 267887
Query 105901 AATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAA 105960
||| |||||||| | || || | |||||||| | ||||| | || |
Sbjct 267886 GATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGAT 267827
Query 105961 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 106020
| | || || || |||| ||| || |||||||| || || ||||| || |||| || ||
Sbjct 267826 GGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAG 267767
Query 106021 ACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA- 106079
||||| | | || | || ||| ||||| || | | |||||| | |
Sbjct 267766 GCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTC 267707
Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCTTGG-GACGTGGGAGAACC 106137
| | ||| || || ||||||| || | || || | |||||| || |||| || ||
Sbjct 267706 GGTCGGTGTCTTCT-CCCACATGTCGTACTGGAGGATGCCCTTGCTGA--TGGGCGAGCC 267650
Query 106138 CTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGC 106197
||| | ||||| |||| || | || | || | ||| ||||| |||||||||| ||
Sbjct 267649 CTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGC 267590
Query 106198 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGC 106257
||| || ||||| || ||||| | || | | || |||||| || || |
Sbjct 267589 GTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGG 267530
Query 106258 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317
| || || || || |||| || ||||| || || || | || || || |||||
Sbjct 267529 ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTG 267470
Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGT 106376
||| | || ||| | | || || || || || |||| |||| |||| ||
Sbjct 267469 GCGCTTGTTGGACGT-CTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGT 267411
Query 106377 TTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAG 106436
| || ||||| | | ||| |||| || || | | || ||||| ||
Sbjct 267410 TGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCG-- 267353
Query 106437 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 106496
|||| |||| ||| | |||||||| || |||| ||||| || ||| ||| |
Sbjct 267352 -CTCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGT 267294
Query 106497 CCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAAT 106556
|||| |||||||| | | ||||| || | |||| | || || || |||| |
Sbjct 267293 CCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGT 267234
Query 106557 TCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 106616
||| ||||| ||||| ||||||| || |||||||||||||||||||||||||| || |
Sbjct 267233 TCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTT 267174
Query 106617 CCGTCTGTGACTTGAGAATTGCCTTCCA 106644
| ||||| |||| || || || | |||
Sbjct 267173 CGGTCTGGGACTCGATGATGGCGTACCA 267146
Score = 104 bits (114), Expect = 3e-17
Identities = 172/244 (70%), Gaps = 6/244 (2%)
Strand=Plus/Minus
Query 107063 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 107122
|| || |||||||| |||| || || |||| |||| | | || || | ||||| ||
Sbjct 266724 CCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCT 266665
Query 107123 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT--G 107180
| ||| ||| ||||| |||| | |||||||| ||||||| |||||| | ||| |
Sbjct 266664 TCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCC--GGTTGG 266607
Query 107181 TACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCG 107239
| || || ||||||||||| || | ||||| ||||| || | | |||| || |
Sbjct 266606 TCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGGAGGTTG 266548
Query 107240 TATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAAC 107299
|| ||||| | | ||| ||||||||| ||||||||| || | | ||| | ||| | |
Sbjct 266547 TAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGC 266488
Query 107300 ATGT 107303
||||
Sbjct 266487 ATGT 266484
>seq541
Length=321934
Score = 91.5 bits (100), Expect = 2e-13
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
|||||| || |||||| || | || ||||| || | ||| ||| || || ||
Sbjct 160833 CTCATCTCTACTTGTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCC 160892
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
|| ||| | ||||| |||| ||||||| || ||||||||||||||||| ||||| ||
Sbjct 160893 CAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACC 160952
Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
|||||| ||||| |||| || || || | |||
Sbjct 160953 CGTCTCTGTCTGCGACTCGATGATGGCGTACCA 160985
>seq120
Length=551038
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
|||| || | | ||| ||||| || ||| || |||||||||||||| || | |||||
Sbjct 520407 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 520348
Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412
||| ||| || ||||| |||||| || ||||||||||| |||||||| || || |
Sbjct 520347 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 520288
Query 117413 CAAAAAGGCGCTC 117425
| | ||| |||||
Sbjct 520287 CCACAAGACGCTC 520275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589847279970200
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