Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1594 120 2e-22
seq619 91.5 1e-13
>seq1594
Length=294527
Score = 120 bits (132), Expect = 2e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || | ||| | || | ||| ||||| ||||||||||| |||||||| || |
Sbjct 184260 CCACCCCTCAGACGGAGGACAAGATGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGAC 184319
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||| ||||| || ||||| |||| | ||| || || || ||
Sbjct 184320 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 184379
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || ||||| || ||||| ||| || | || | ||||| | ||||||
Sbjct 184380 ATGCCCTCCTTATCCTGGATTTTGGCTTTGACGTTCTCAATGGTGTCGCTGGGTTCCACC 184439
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACG 101476
|| || |||| ||||||||||| | || || ||||| ||||||||| || ||
Sbjct 184440 TCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGTTTGCG 184493
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || | ||| | ||| | || |||||||||||||| || || ||||||||||
Sbjct 183804 CCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAATCGGAC 183863
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| |||| ||||| || ||||| |||| | ||| || || || ||
Sbjct 183864 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 183923
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || ||||| || ||||| || ||| | || | |||||| | || |||
Sbjct 183924 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACT 183983
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || |||| || |||||||| | || || || || |||||||||
Sbjct 183984 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 184031
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || |||||||| || || ||||| || | | || | | |||| |||| |||
Sbjct 188248 TGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGC 188307
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| |||| | ||| || || || || ||||| || ||||| || || ||
Sbjct 188308 TTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTG 188367
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||| | ||||| ||||| |||| |||||||||||
Sbjct 188368 GCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTGCCGGTG 188427
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| ||||| ||||||||
Sbjct 188428 AGGGTTTTCACAAAGATCTGCAT 188450
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || | ||| | ||| | || ||||| || || || || || ||||| || | |
Sbjct 187996 CCACCCCTCAGACGGAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 188055
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||| ||||| || ||||| |||| | ||| || || || ||
Sbjct 188056 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 188115
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || ||||| || ||||| || || | || | |||||| | || ||
Sbjct 188116 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 188175
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || |||| ||||||||||| | || || || || |||||||||
Sbjct 188176 TCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 188223
>seq619
Length=304156
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || || || || || ||||| || | | || | | |||| |||| ||
Sbjct 191792 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGT 191733
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| |||| | ||| || || || ||||||||||||||||| ||||| |||
Sbjct 191732 TTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTT 191673
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | |||||| | ||||| || || || | || || || ||
Sbjct 191672 GCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTCCCAGTG 191613
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| |||||| || || ||||||||
Sbjct 191612 AGAGTTTTCACGAAAATCTGCAT 191590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396190959313485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |