Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq406 360 4e-94
seq768 102 2e-16
seq541 93.3 8e-14
seq120 87.8 3e-12
>seq406
Length=364117
Score = 360 bits (398), Expect = 4e-94
Identities = 866/1295 (67%), Gaps = 38/1295 (3%)
Strand=Plus/Minus
Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGC 221424
|| ||||||| ||||||||| ||| | | |||| | |||| | || || |||||
Sbjct 267651 CCCTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCA-GCTGGCCTCCAGGGC 267593
Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAA 221484
||||||||||||||||| |||||| ||||||| || ||| ||||| |||
Sbjct 267592 GGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAA 267533
Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544
|| |||| || ||| | |||||||| ||||| || ||||| ||||| |||||
Sbjct 267532 CGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCT 267473
Query 221545 GTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATT 221604
||| | | ||||||| | | ||||| || || || || | |||| |||||| | ||
Sbjct 267472 GTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTT 267413
Query 221605 GTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA 221664
||||||||| ||| || || || || |||||||| | | ||| |
Sbjct 267412 GTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAA-----A 267358
Query 221665 CTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724
|| | | | |||| | ||| ||| ||||| | | ||||||||| ||
Sbjct 267357 GTCCGCTCTGGCGTGACGT------ACAT----GTTGAGGGCGATGGAGGCCAGGTTGCA 267308
Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784
|||||||||||||||||| |||| |||| | | |||||| |||||||||||||| ||
Sbjct 267307 GACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTT 267248
Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844
|||||| ||||||| | || || ||| | ||| |||||||||||||||||| |
Sbjct 267247 GATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTA 267188
Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCA 221903
||| || || || ||| | | | | || || |||||| | ||| || |||
Sbjct 267187 GGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGCTG-CTGCGCCTTCA 267129
Query 221904 CCGTCCTCTTGACTGCACCCTCGGT--CTTTTCATACCCGGTATAGAGCATGTCAAACTT 221961
|| |||||| ||||||| | ||| ||||| | ||| |||||| | || ||||
Sbjct 267128 CCACCCTCTT-----CACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTC 267074
Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTT 222021
|| || | ||||||||| || |||||| | ||||||||||| ||||| ||
Sbjct 267073 CTCTCCCCAGCACTCGTCCAGCCCAGGACACTCGCTGGGACACATCAAGGACCAGTCCTG 267014
Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081
|||| || || |||| |||||| |||||||||||||||| || | || || |||||
Sbjct 267013 GTTGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCT 266954
Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141
|| | |||||||||| || |||| ||| |||| |||| || || || | |||
Sbjct 266953 GGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAA 266894
Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
||||||||| ||||| || | ||| | || ||||||| ||||||||| ||||| || ||
Sbjct 266893 GTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGAC 266834
Query 222202 CATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261
| || |||| | | | || |||| |||| ||||||||| |||||
Sbjct 266833 GTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTT 266774
Query 222262 GGTGCCCTTAATGTACGCACCGCCGGCCCTC--AGGTTACTGGCAGACATGCCGATACCA 222319
|||||| |||||| || | ||| | || | | || | | || |||||| ||
Sbjct 266773 GGTGCCGGCAATGTA-GCTTC-CCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCC 266716
Query 222320 CCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAG 222379
|| ||| || || || | ||||| ||| || ||||| |||||| || || |
Sbjct 266715 CCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTG 266656
Query 222380 TCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTA 222439
|| ||||| | | ||||| || || |||| ||| | | ||| | ||||||
Sbjct 266655 TCGTCCTTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTG 266596
Query 222440 AACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACG 222499
|| || || ||| |||||| || || | | |||| || | ||| ||||| | |
Sbjct 266595 AAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATG 266536
Query 222500 ACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGC 222559
| | | |||| |||||| ||| | | |||||| ||||| ||| |||
Sbjct 266535 GCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGC 266476
Query 222560 CTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAAC 222616
| || |||| ||| | || || |||||||| || ||||||||||||||
Sbjct 266475 CGCTCGGCCAC-TTTCCCGTTGATCT--TCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAA 266419
Query 222617 CCAAAGTAGTTG-AGGTCAAAGTCTCTGCCGTGAA 222650
|| ||| ||||| ||| ||| |||||| ||| ||
Sbjct 266418 CCGAAGAAGTTGTAGGAGAAA-TCTCTGTCGTAAA 266385
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124
|||||| || |||| || || | ||| ||| |||||| | ||| ||| || |
Sbjct 267943 CATCTCCTCGTTCCACAGGCCACGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGAT 267884
Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184
||||| ||||| || |||||||| | ||| | ||| ||| ||| ||||||
Sbjct 267883 CTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGA 267824
Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244
||||||||||||||||||||| || ||| || ||||||||||| |||| |||||| ||
Sbjct 267823 CTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCT 267764
Query 221245 GTT 221247
|||
Sbjct 267763 GTT 267761
>seq768
Length=308456
Score = 102 bits (112), Expect = 2e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| ||||| ||||| |||||||| ||||| ||| |||||||| || ||||||||||
Sbjct 127838 TGGTGGCCTTCGCTGCCGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCCATCTTCT 127897
Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002
|||| ||| ||| || ||||| || ||| ||| ||||||||||||||| | |
Sbjct 127898 GGCTGAAGAAGAGAGGCCTGATGCCTGGCCTGACCTTCAGCAACGAGCTCATCAGTCGAG 127957
Query 26003 ACGAGG 26008
||||||
Sbjct 127958 ACGAGG 127963
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
|||||||||||||| ||||| ||||| || |||| |||||||||||||||||||| |||
Sbjct 128749 AACCCGTTCGACTTCATGGAGAACATTTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAG 128808
Query 26305 AGGGTCGGCGACTATCA 26321
||||||| || || ||
Sbjct 128809 CGGGTCGGGGAGTACCA 128825
>seq541
Length=321934
Score = 93.3 bits (102), Expect = 8e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096
|| ||| |||||||| || ||||||| || || || ||||||| | |||||| ||
Sbjct 161314 CTTCATAAAGAGGTCTGGAATCCACAAGGCAAAGAACAGGTCTCTGGCTCTCTGCTCTTC 161373
Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156
|| |||| ||| |||| |||||||||||||| | |||||| ||||||||||||||
Sbjct 161374 TTTACCCGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCATGCCACGGCTCCAG 161433
Query 222157 ATAGAC 222162
|| ||
Sbjct 161434 GTACAC 161439
>seq120
Length=551038
Score = 87.8 bits (96), Expect = 3e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| || || || || || || |||||||| ||||| ||| || || || ||
Sbjct 520272 GGGGAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATCTTCTTCTCAGGCTCATTCGCT 520331
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|| |||| |||||| ||| ||| || |||||| || || || |||||||| |||
Sbjct 520332 GCTATCTACTGGCTGAAGAAGAGAGGCCTCATGCCAGGCCTTACCTACTCCAACGAACTC 520391
Query 25993 ATCAGCAGGGACGAGG 26008
|| |||||||||||||
Sbjct 520392 ATTAGCAGGGACGAGG 520407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928634590811200
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