Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq378 140 4e-28
>seq378
Length=373364
Score = 140 bits (154), Expect = 4e-28
Identities = 569/880 (65%), Gaps = 35/880 (4%)
Strand=Plus/Plus
Query 160085 GTCAACGTCTTC---GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCA 160141
|||| || |||| ||| || |||||||| || || || || | ||| |||| |||
Sbjct 251273 GTCATCGACTTCTGGGTCAAACTTATTTGCAAAGAGGTGCTG--CTGTCTC-AGGAGCCA 251329
Query 160142 GTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGG 160201
| | ||| |||| ||| |||| || |||| | ||| || | || ||
Sbjct 251330 CAGGAGGTCGCCGGCGCCGTACACACACACGGCTCTCCTGTAGGTCCCCATACATGGATA 251389
Query 160202 GTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTAT 160261
|||| |||||||||| |||||| ||| | || |||||| ||| | ||| |
Sbjct 251390 GTACGGAGCTCCTTTTTTCACGTCTCCTGTTAAATAAGACCACTTGACAGCTCGGGCGAG 251449
Query 160262 CGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGG 160321
||| |||||| || ||||| |||||| | |||| | || ||||| ||
Sbjct 251450 AGCCATCATGTCCGATGTGTCATATTTGCCGTTTGGGGGCGTTGATCCAGGAACCGAGGA 251509
Query 160322 CATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTC 160381
||| | ||| ||||||||||||| ||||||||| || ||||| ||||| || ||||||
Sbjct 251510 CATCCTCTGCAGGGTGGCCCACATGTGTTCGTCTGGACTGTATGTGTCTTTTTCCCATTC 251569
Query 160382 CATGAACTCTCCGATTAACCTGTCCC----GCAGAACGTGAGTAACGTAGGATCTGGTCA 160437
|||||| | || || |||| ||| ||| |||| | || ||| || | |
Sbjct 251570 CATGAATT-TCTGA---ACCTCTCCGTTCTGCATCACGTATTTCACAAAGGCCCTAGAGA 251625
Query 160438 CGACAAAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTG-TCTTTGTCC 160496
| |||||||| ||| | || ||||| || || | || ||||| | | | ||| ||
Sbjct 251626 CCACAAAGTAGGCGTTTCCTGAGAACATTGGGCTACTGATGGGCGGTGGGCTTTTTCTCA 251685
Query 160497 TGACCGGTGTTAGACACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCAT- 160555
| ||| | | | || || || | | ||| | | || ||| | |||| |
Sbjct 251686 CGTCCGTTCTGATG----ACGCCGTTGGCGACATTGTGGTGGTACTGCCAGC-GACCTTT 251740
Query 160556 CTTGTG--CGGTGGCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGC 160613
|||| | ||| || ||| || || | ||||| || | ||| ||||||
Sbjct 251741 CTTGGAGACACTGG--TGACTTCAGTTTCCATGCTGTTCCTCCCATTGAGGACTTTCAGA 251798
Query 160614 TGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACG 160673
| | || ||||| || || |||| |||||||| || || || || | | |
Sbjct 251799 GCCATCACCATCTCCCTATTGGTTTTGATGGGAAAGTCTGTCCCACAGGTATTCAAAAGG 251858
Query 160674 TACTTCCATTTCGCGCT-CAG-GTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCA 160731
|| ||||| || || ||| || |||| || ||||||| || | |||||||||||
Sbjct 251859 TATTTCCAC--CGAACTTCAGAGTGCAGCAGATCTTTCATGCAGTTCAGATCTGCCTGCA 251916
Query 160732 CGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGA 160791
| | | ||| ||||| ||||| || | |||| ||||||||| ||||| || || |
Sbjct 251917 CTCTGGACCATGAAGCATACACAACACTTTCTAATTTACTGGCTACAAAAACATTGGGAA 251976
Query 160792 AACACGACACGATTCCCACCACCGCC---AGAAAGAACATCTTATCCGCCTTTCGGTCCA 160848
| || || || ||| || ||| ||| |||| ||| | | ||| |||| |
Sbjct 251977 AGCAGGAAACTATTTCCTTCACAGCCCTGTGAAAAGACAGGGAA---GACTTCTGGTCAA 252033
Query 160849 CGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCT 160908
|| ||||| || | |||||| || || || || | | || | | || |||||||
Sbjct 252034 TATGGACGCAGTAGATGTTCTGCGGAGCATAAATAGATCGTAGGAGTCGTTCAAACATCT 252093
Query 160909 CTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAA 160948
||||||| | |||||||| || ||||| || || |||||
Sbjct 252094 CTATCTTCTCGTGGATCACCATGGAGTATGCAATGGGAAA 252133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577088568079800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |