Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1594 87.8 3e-12 >seq1594 Length=294527 Score = 87.8 bits (96), Expect = 3e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| |||| || || || ||||| | || | ||||| ||||| ||||| Sbjct 184257 ATGCCACCCCTCAGACGGAGGACAAGATGGAGGGTGGATTCTTTTTGGATATTGTAGTCA 184316 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || ||||||||||| || | ||||| || ||||| Sbjct 184317 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGG 184376 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || ||||| || ||||||| ||| | || ||| || ||| | || Sbjct 184377 GGGATGCCCTCCTTATCCTGGATTTTGGCTTTGACGTTCTCAATGGTGTCGCTGGGTTCC 184436 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || ||||| || || || || || ||||| || ||||| || Sbjct 184437 ACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGTT 184489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899450796963600