Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq343 84.2 6e-11 >seq343 Length=382298 Score = 84.2 bits (92), Expect = 6e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || ||||| || || || ||||| | | || ||||| || |||||||| | ||| Sbjct 246666 GTCTTGACAGCCGTGTCGATCAGACCCTCTCTGCCTCCCATGGCGTGGAAGAAGAACTCG 246725 Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 ||| ||| ||||| | | ||||| |||| || || || || |||||| | Sbjct 246726 GTCGG-CGTCAGCCCGGCCAGGTAGGAGTTCTCCACAAAGCCTCGGCTCTCGGGGCCGTA 246784 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | ||||| ||||| || | || || | ||| | ||||| ||||| || Sbjct 246785 GTCGTCCTTGATGAAGTGAGGCAGCGTGCGGTGCTTGAACCCGAAGGGGATTCGCTTACC 246844 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 246845 CTCCACGTTCTGCTGGCCCA 246864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471476182011385