Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq406 187 2e-42
seq619 114 1e-20
seq1594 113 4e-20
>seq406
Length=364117
Score = 187 bits (206), Expect = 2e-42
Identities = 974/1526 (64%), Gaps = 49/1526 (3%)
Strand=Plus/Minus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | || ||| || || |||| || || | || ||| |||||| ||||| | |
Sbjct 267892 GTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGC 267833
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| | || |||||||| ||||| ||||| || |||| ||| || |||||| |||||
Sbjct 267832 CTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAG 267773
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
|| || |||| | ||||| ||| ||||| ||| | |||||||||
Sbjct 267772 CAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCA 267713
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740
|| ||| | ||| | || | |||||| |||||||| | || ||| || |||
Sbjct 267712 CAGGTCGGTCGGTGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGATGGGCGA 267653
Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800
||| ||||||| ||||| || | |||| || | ||| ||| ||||| || ||
Sbjct 267652 GCCCTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGC 267593
Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860
| | ||| || || ||| ||||| ||||||| |||| |||| ||| ||| |
Sbjct 267592 GGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAA 267533
Query 138861 CGGCATG-CGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919
||| ||| || | || |||| || |||||||| || || ||||| | |||| || |
Sbjct 267532 CGG-ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCC 267474
Query 138920 GATGGCGCAGATTTGACGCTTTTGCGGCTTC---GATAGGATAATAGTTTACATCGATGA 138976
|||||| || |||| | ||||||| || || || || || | |||||||
Sbjct 267473 TGTGGCGCTTGTTGGACG---TCTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGA 267417
Query 138977 TTTTGTTTAAATTTCGCACGACCACCTTAGT--CGTATGCTTTAATCGTTCAAAATCGTA 139034
| ||||| | ||| ||||| ||||| || || | || || | || ||| |
Sbjct 267416 TCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTC--TTGAAGTCGAA 267359
Query 139035 TGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTT 139094
|| || | || ||| ||||| ||| |||||| || ||||| | |||
Sbjct 267358 AGT--CCGCTCTGGCGT----GACGT--ACA----TGTTGAGGGCGATGGAGGCCAGGTT 267311
Query 139095 GCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACA 139154
||| || ||||| ||||| | | |||| || || | || | || | || || ||
Sbjct 267310 GCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCA 267251
Query 139155 CTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCAT 139214
||||| || || | || || || ||||| || | ||| ||||| || ||||| |||||
Sbjct 267250 TTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCAT 267191
Query 139215 ATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTG 139274
|| || || || ||||| || | ||| || ||| | | | | | || |
Sbjct 267190 GTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCTT 267131
Query 139275 TATTTGACGCACGTAAAGTT--CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCG 139331
| || | | | | | | || ||| || | |||||| | ||||| ||
Sbjct 267130 CA--CCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCC 267073
Query 139332 T-TCACC-GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACG 139389
| || || | | |||| || | |||||| | |||||||| | ||||| |
Sbjct 267072 TCTCCCCAGCACTCGTC---CAGCCCAGGACACTCGCTGGGACACATCAAGGACCAGTC- 267017
Query 139390 CCGTTCGCCTT-GACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATC 139448
| | | || || || | | |||||||||| ||||| |||||||| ||| | | | ||
Sbjct 267016 CTGGTTGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTC 266957
Query 139449 GCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTC 139508
| || ||| || ||| || |||| |||| | ||||| || || |||||
Sbjct 266956 TCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTC 266897
Query 139509 AGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATC 139565
|||||| |||||||| || ||||| | || || | || ||||| || || ||
Sbjct 266896 GAAGTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTC 266837
Query 139566 GACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCC 139625
||||| || | | || ||| | || | || |||||| ||| ||| | | | ||
Sbjct 266836 GACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCC 266777
Query 139626 GTTGGTGCTACGG--ATGGGACTGTTGCG-AGCTCGGACGTCATGT-ACATTGATGCCGA 139681
|||||||| ||| ||| || | || | ||||| | || | || | |||||
Sbjct 266776 GTTGGTGC--CGGCAATGTAGCT-TCCCGTCGATCGGATG-CAGCTCACCGCCACGCCGA 266721
Query 139682 TTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTT 139740
| || || | | ||||| || | |||| | || | | || ||||| || |||
Sbjct 266720 TCCCCCCAGCGGACTTGGAAATGAGCGCGCACT-GCTTCAGGGTGTCGTAGATGCCTTCG 266662
Query 139741 ATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCG 139800
||||||||||||| ||| | | ||| ||||| || || ||||| | || || |||
Sbjct 266661 ATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCG 266602
Query 139801 GCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTT 139860
|| || || || ||| ||||| |||||| | | ||||| | | ||| ||
Sbjct 266601 GCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTC 266542
Query 139861 TCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGT 139920
|||||||| |||| || | |||||||| || || || || | ||| ||||| ||
Sbjct 266541 TCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGC 266482
Query 139921 TGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTG 139980
|| ||| |||||||| || | ||| || ||| || | ||| || ||||||
Sbjct 266481 TGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTG 266422
Query 139981 TAGCCAAAGTACCTATAGTTGAAATC 140006
| || ||| | | ||| ||||||
Sbjct 266421 AAACCGAAGAAGTTGTAGGAGAAATC 266396
>seq619
Length=304156
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || ||||| || || || || |||
Sbjct 191589 GATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGGAGCCCAG 191648
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||| || || |||||||| || ||||| || ||
Sbjct 191649 TGACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCA 191708
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || ||||||||||| ||| | | | |||| || || ||
Sbjct 191709 GCAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAA 191768
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || ||| ||||| | || || | |||||
Sbjct 191769 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGG 191816
>seq1594
Length=294527
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | ||||| || ||||| ||||| || || || || || || |||
Sbjct 188451 GATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCCAG 188392
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| || || || || || || || || ||
Sbjct 188391 TGACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 188332
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| ||| | | | |||| || || ||
Sbjct 188331 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 188272
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || ||||| ||||| ||| ||||
Sbjct 188271 CATCCAGAAAGAATCCACACTCCACCTGGT 188242
Score = 109 bits (120), Expect = 5e-19
Identities = 152/209 (73%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| ||||| || || || || || ||| ||| |
Sbjct 184486 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAACCCAGC 184427
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| ||||| || || || || || || || || ||
Sbjct 184426 GACACCATTGAGAACGTCAAAGCCAAA-ATCCAGGATAAGGAGGGCATCCCCCCTGACCA 184368
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| ||| | | | |||| || || ||
Sbjct 184367 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 184308
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|| ||||| ||||| || || || ||||
Sbjct 184307 TATCCAAAAAGAATCCACCCTCCATCTTG 184279
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || ||||| || |||
Sbjct 184030 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 183971
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||| || || || || || || || || ||
Sbjct 183970 GACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 183911
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||||| || |||||||||||| | | |||| ||||| |||
Sbjct 183910 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGATTACAAC 183851
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| || || ||||| || || |||
Sbjct 183850 ATCCAGAAAGAATCTACCCTCCAC 183827
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || ||| |
Sbjct 184258 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 184199
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || || || || ||
Sbjct 184198 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 184139
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | |||| || || |||
Sbjct 184138 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 184079
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||| ||||
Sbjct 184078 ATCCAGAAGGAGTCCACCCTTCACCTGGT 184050
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| ||||| || || || || || || |||
Sbjct 188222 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTTGAGCCCAGT 188163
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||| || || || || || || || || ||
Sbjct 188162 GACACCATTGAGAACGTCAAGGCCAAA-ATCCAGGATAAGGAGGGCATCCCCCCTGACCA 188104
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| ||| | | | | || || || ||
Sbjct 188103 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 188044
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
||| || ||||| || || || |||
Sbjct 188043 CATCCAGAAGGAGTCCACCCTCCAC 188019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449795782549400
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