Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq619 114 1e-20 >seq619 Length=304156 Score = 114 bits (126), Expect = 1e-20 Identities = 157/218 (72%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 107549 GTTTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG 107607 ||||||| ||||| ||||| || |||||| | || || || ||||||||| | || || Sbjct 191582 GTTTAAAGATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGG 191641 Query 107608 AGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCG 107667 || | | || || | | | || || ||||||| |||||||||||| | || Sbjct 191642 AGCCCAGTGACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTC 191701 Query 107668 TGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGG 107727 || ||||||||||| || | ||| || ||||||||||| || | | || || ||| Sbjct 191702 CTGACCAGCAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGG 191761 Query 107728 ACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||||||| || |||||||| || | ||| ||||| Sbjct 191762 ACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 191799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398788785964345