Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1594 98.7 2e-15
>seq1594
Length=294527
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || || ||||| ||||||| || ||||
Sbjct 184027 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTTGAGCCCAGTGAC 183968
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || || || || || || || || || ||| ||
Sbjct 183967 ACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCAGCAG 183908
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| ||||| |||||| |||| ||||| | ||| || ||||||||||| ||
Sbjct 183907 AGGCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGATTACAACATC 183848
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
|||||||| ||||| || |||||||||
Sbjct 183847 CAGAAAGAATCTACCCTCCACCTTGTT 183821
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| ||||| || ||||| ||||| | || ||||| ||||
Sbjct 188447 CAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCCAGTGAC 188388
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || || || || || ||| ||
Sbjct 188387 ACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAGCAG 188328
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| |||||||||||| |||||||||| | || || | || |||||| ||
Sbjct 188327 AGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACATC 188268
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||||| || || || ||||| ||
Sbjct 188267 CAGAAAGAATCCACACTCCACCTGGT 188242
Score = 87.8 bits (96), Expect = 4e-12
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || ||||| ||||| |||| |||||| |||
Sbjct 184483 CAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAACCCAGCGAC 184424
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || ||||| ||| || || || || || || || || ||| ||
Sbjct 184423 ACCATTGAGAACGTCAAAGCCAAA-ATCCAGGATAAGGAGGGCATCCCCCCTGACCAGCA 184365
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| || ||||| |||||||||||| |||||||||| | || || | || ||||| |
Sbjct 184364 GAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAATAT 184305
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
||| ||||| || || || || |||||
Sbjct 184304 CCAAAAAGAATCCACCCTCCATCTTGT 184278
Score = 86.0 bits (94), Expect = 1e-11
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || ||||| ||||| |||| || || ||||
Sbjct 188219 CAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTTGAGCCCAGTGAC 188160
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || || || || || || || || || ||| ||
Sbjct 188159 ACCATTGAGAACGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCAGCAG 188100
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| |||||||||||| |||||||||| | || | | || |||||| ||
Sbjct 188099 AGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAACATC 188040
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| || || |||||||||
Sbjct 188039 CAGAAGGAGTCCACCCTCCACCTTGTT 188013
Score = 84.2 bits (92), Expect = 5e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822
||||||||| || || ||||| ||||||| || ||||||| | || | ||||||||
Sbjct 188013 AACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTC 188072
Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848
||||||||||||||| ||||| ||||
Sbjct 188073 CAGCTGCTTTCCGGCAAAGATCAGCC 188098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181546652659705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |