Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq318 102 3e-18
seq1167 100 9e-18
seq1654 98.7 3e-17
seq612 98.7 3e-17
seq608 98.7 3e-17
seq37 98.7 3e-17
seq175 91.5 5e-15
>seq318
Length=399903
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 24535 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 24476
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 24475 TCCCGGGTTTCGGC 24462
>seq1167
Length=199563
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 153288 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 153229
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 153228 CCCGGGTTTCGGC 153216
>seq1654
Length=148896
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 72975 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 73034
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 73035 CCGGGTTTCGGC 73046
>seq612
Length=305506
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 299626 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 299567
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 299566 CCGGGTTTCGGC 299555
>seq608
Length=305984
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 5711 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5770
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5771 CCGGGTTTCGGC 5782
>seq37
Length=764969
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 194331 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 194272
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 194271 CCGGGTTTCGGC 194260
>seq175
Length=494707
Score = 91.5 bits (100), Expect = 5e-15
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||| ||||||||| | ||||||||||||| |||||||||||||||
Sbjct 337101 ATCGCCGAAATAGCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCA 337160
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 337161 ATCCCGGGTTTCGGC 337175
Score = 86.0 bits (94), Expect = 2e-13
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||
Sbjct 332933 ATCGCCGAAATACCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCA 332992
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 332993 ATCCCGGGTTTCGGC 333007
Score = 78.8 bits (86), Expect = 3e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||| ||||||||| | ||||||||||||| ||||| |||||||||| |
Sbjct 332622 GCCGAAATAGCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGAAGGTTCCTGGTTCAATC 332681
Query 2829 CCGGGCTT 2836
|| || ||
Sbjct 332682 CCAGGTTT 332689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15846461407725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |