Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq406 383 2e-101
seq541 98.7 1e-15
>seq406
Length=364117
Score = 383 bits (424), Expect = 2e-101
Identities = 1270/1959 (65%), Gaps = 37/1959 (2%)
Strand=Plus/Minus
Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712
||||| ||||| || ||||||| | |||||| | | | ||||| || || ||
Sbjct 267948 TTCTTCATCTCCTCGTTCCACAGGCCACGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTG 267889
Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772
|| || || || || || || | ||| || || ||||| || || ||||| || | ||
Sbjct 267888 ACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCG 267829
Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832
| || || || || ||||| || || || || || || || ||||| || |||| ||
Sbjct 267828 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGC 267769
Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892
| || || || | || ||| | ||| || || || || | ||||| ||||| ||
Sbjct 267768 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 267709
Query 68893 TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATG----A 68948
|| | ||| | ||| | ||||| || || || || ||||| ||| |
Sbjct 267708 TCGGTCGGTGTCTTCTCCCACATGTCGTACTGGAGGATGCC----CTTGCTGATGGGCGA 267653
Query 68949 TCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGC 69008
|| | || || || || || || || | | || ||||| || || ||||| | ||
Sbjct 267652 GCCCTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGC 267593
Query 69009 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAA 69068
||| || || || ||||| |||| | ||||| || ||||| | || |||||
Sbjct 267592 GGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAA 267533
Query 69069 TGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128
|||| | | || || || ||||| |||| ||||| || || || ||||| || ||
Sbjct 267532 CGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCT 267473
Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188
|| | ||| || || | || ||||| || | || || ||||| || || || || ||
Sbjct 267472 GTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTT 267413
Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCC 69248
|| || ||| || | ||| || ||| || || || || || ||||
Sbjct 267412 GTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAA-GTCC 267354
Query 69249 A-TCTA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT 69304
||| | || |||| || || || | || || || || || || || ||||| |
Sbjct 267353 GCTCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGT 267294
Query 69305 TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364
| | || | | | |||||| || || || || |||||||| || ||||| |
Sbjct 267293 CCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGT 267234
Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424
| ||||| || ||||| |||| || ||||||||||| || || | || || || ||||
Sbjct 267233 TCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTT 267174
Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAAC 69484
| |||| || ||||| || | | ||| | | || || | || |||| ||
Sbjct 267173 CGGTCTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTC--AC 267116
Query 69485 GCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATC 69542
|| | || || |||||| || || ||| ||||| || |||||||| || ||
Sbjct 267115 CCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTC 267056
Query 69543 CAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTA--ACTCGT 69600
|| |||||||| || | ||||||||||| ||||| | | | | ||| ||||
Sbjct 267055 CAGCCCAGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGT--TGCTTTCCACTCTC 266998
Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTC 69659
||||| || || || || ||||| | || || ||| || ||||||| ||| | || ||
Sbjct 266997 TTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTC 266939
Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719
|||||||| || || || || || || || || | | || | ||||| ||||| ||
Sbjct 266938 CTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAG 266879
Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779
|| || || | | | || |||| || || || ||||| || | ||| | || |||||
Sbjct 266878 GTACATGGCAAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTT 266819
Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839
|| || |||||||||||||| | | || || || || || || || || | ||| ||
Sbjct 266818 GTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTA 266759
Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899
||||| | | || || || | | | || || || || || || || ||
Sbjct 266758 GCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAAT 266699
Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959
|| || || | |||| ||||| || || || || ||||| || || ||||| |||
Sbjct 266698 GAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCAAG 266639
Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019
|| || ||||| |||| || | | | || || || || || | || ||||| ||
Sbjct 266638 CAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGC 266579
Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCA 70079
||| |||||||| || || || || || ||||| || || || || | || || || |
Sbjct 266578 GTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCG 266519
Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139
| || || || | || || | ||| | ||| ||||| || || || || |||
Sbjct 266518 CCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCC 266459
Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAA 70199
|| || |||| |||||| || |||||||| || || || || ||||||| || ||
Sbjct 266458 GTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAGGAGAA 266399
Query 70200 GTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATC--- 70256
||||| |||||||| || ||||| || ||||| | || | || || ||
Sbjct 266398 ATCTCTGTCGTAAATGATGGAGGAATTGAGGCGGTCCTTGTTTTCCATGACGATGTCGAG 266339
Query 70257 CATAACAGTAGGTGAGATAATCGGAGA---TCGTTTACCATTTTTAGGATTAACATAGTT 70313
| | | | ||||| || ||||| ||||| || ||| || || |||
Sbjct 266338 CGTCTCCTT---GGAGATCATGGGAGAGTGGCGTTT---GTTCAGAGGGTTGACGTAGGC 266285
Query 70314 GAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATAT 70373
||| | |||||||| || || || || | || || || |||||||| | || || |
Sbjct 266284 GAACAGGTCTTCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAGGTTGGAGAC 266225
Query 70374 GGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTAT 70433
||| || || || || || || || ||||| || |||| || || || || || ||
Sbjct 266224 GGCAATCCTCGCGGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGTGGCCGCGAT 266165
Query 70434 TTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAAC 70493
||||| |||| ||| || | || | || || || ||| | || | || || || ||
Sbjct 266164 CTCCGCCGCTAGCGTGTCAAGCTCCACGGTGGTGACGCCGCTGTACAAGCCCTGGATCAC 266105
Query 70494 TTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT 70553
||||||| || | ||||| | || || | |||||| || || || || ||||
Sbjct 266104 CTTCATGGTGATCTGAGCTGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA-AAGCTTCT 266046
Query 70554 -AATACGAGATGTAATTTTATCAAACATAACATTCTCCT 70591
|| || || || |||||||| ||||| || |||||
Sbjct 266045 GGATGCGGGAGGTGATTTTATCGAACATGACGCGCTCCT 266007
>seq541
Length=321934
Score = 98.7 bits (108), Expect = 1e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384
|||||||| || ||||| || | ||||| || |||||||||||||| || |||| ||
Sbjct 160858 ATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTCTTCCTG 160917
Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443
|| |||||||||||||| || || |||| ||||| || || |||| || ||||| ||
Sbjct 160918 TTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTGCGACTCGATGAT 160976
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || || || || | |||||||| |||||||||||||| || || |||||||| |||
Sbjct 162375 GTGCCGGCGTTGAACAGGGTAGGAGAGGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 162434
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
|||||||||| ||||| || || || | ||||| || | || || | ||||| |
Sbjct 162435 TATGTTTCAACAGCTGCATCAATGTCTTCTTTGTGAATCCCGACTGCCACTCTCATCAGC 162494
Query 70111 ATATGCTGAGGTC 70123
|| ||||| ||||
Sbjct 162495 ATGTGCTGGGGTC 162507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686753343952200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |