Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq157 91.5 1e-13 seq2891 82.4 6e-11 >seq157 Length=512728 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 41076 TGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGAC 41135 |||||||| ||||| ||| | || || ||||| ||||| |||| || | || | ||| Sbjct 348094 TGTCAGTTCTACGTCTGCGACGGGGAGCTGTCTTGTCAGCTGTACCAGCGCTCCGCCGAC 348153 Query 41136 ATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCA 41195 ||||| || || || || || ||||| || || || || || ||||| || ||||||||| Sbjct 348154 ATGGGTCTGGGCGTGCCTTTCAACATCGCCAGCTACGCACTTCTCACCTACATGATTGCA 348213 Query 41196 CACGTTAC 41203 ||| |||| Sbjct 348214 CACATTAC 348221 >seq2891 Length=67623 Score = 82.4 bits (90), Expect = 6e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370 |||||| || |||||||| | || || |||||||| |||| ||||| || |||||| Sbjct 18703 CCAGACCACATCCAGCTCAGAGTTCAGCCGGTCCAGCGTCATGAAGTCTTCTTTGTTGGT 18762 Query 77371 AA-CTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAG 77429 | | |||| | | | | |||||||||||||||| |||||| |||| ||||| | | Sbjct 18763 GATCGGACCACCAGACTT-CAGCCTCCAGCCGTTCACTTTCCAGGTCTTCACCCAACTGG 18821 Query 77430 TCACACC 77436 ||||||| Sbjct 18822 TCACACC 18828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397368299470525