Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq157 91.5 1e-13
seq2891 82.4 6e-11
>seq157
Length=512728
Score = 91.5 bits (100), Expect = 1e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 41076 TGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGAC 41135
|||||||| ||||| ||| | || || ||||| ||||| |||| || | || | |||
Sbjct 348094 TGTCAGTTCTACGTCTGCGACGGGGAGCTGTCTTGTCAGCTGTACCAGCGCTCCGCCGAC 348153
Query 41136 ATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCA 41195
||||| || || || || || ||||| || || || || || ||||| || |||||||||
Sbjct 348154 ATGGGTCTGGGCGTGCCTTTCAACATCGCCAGCTACGCACTTCTCACCTACATGATTGCA 348213
Query 41196 CACGTTAC 41203
||| ||||
Sbjct 348214 CACATTAC 348221
>seq2891
Length=67623
Score = 82.4 bits (90), Expect = 6e-11
Identities = 96/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370
|||||| || |||||||| | || || |||||||| |||| ||||| || ||||||
Sbjct 18703 CCAGACCACATCCAGCTCAGAGTTCAGCCGGTCCAGCGTCATGAAGTCTTCTTTGTTGGT 18762
Query 77371 AA-CTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAG 77429
| | |||| | | | | |||||||||||||||| |||||| |||| ||||| | |
Sbjct 18763 GATCGGACCACCAGACTT-CAGCCTCCAGCCGTTCACTTTCCAGGTCTTCACCCAACTGG 18821
Query 77430 TCACACC 77436
|||||||
Sbjct 18822 TCACACC 18828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397368299470525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |