Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1594 102 5e-17
seq619 95.1 8e-15
>seq1594
Length=294527
Score = 102 bits (112), Expect = 5e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | |||| ||||| ||| || || || ||||| || || ||
Sbjct 188223 GCCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGA 188282
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || || |||||||| || | | ||| ||||| || ||
Sbjct 188283 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 188342
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| |||||||| || |||||| | ||||| | ||| ||||| | |||||
Sbjct 188343 GATGCCCTCCTTATCCTGGATCTTG-GCCTTAACATTCTCAATGGTGTCACTGGGCTCCA 188401
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
| || | ||| || ||||| ||||| | ||||||||||| |||||||| |||
Sbjct 188402 CCTCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCTTG 188454
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | || | |||||| ||| || ||||| || || || || ||
Sbjct 184259 GCCACCCCTCAGACGGAGGACAAGATGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGA 184318
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || || |||||||| || | | ||| ||||| || ||
Sbjct 184319 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 184378
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| |||||||| || ||| ||| | ||| ||| | ||| ||||| | ||||
Sbjct 184379 GATGCCCTCCTTATCCTGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCGCTGGGTTCCA 184437
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
| |||| ||| || ||||| ||||| | || || ||||| |||||||||||
Sbjct 184438 CCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGTT 184489
>seq619
Length=304156
Score = 95.1 bits (104), Expect = 8e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || || | ||||| ||||| ||| |||||| || ||||| || || ||
Sbjct 191816 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAC 191757
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| || ||||| || ||||| || | | ||| ||||| || ||
Sbjct 191756 AGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGA 191697
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || || || || |||||| | || ||| | ||| ||||| | ||||||
Sbjct 191696 ATGCCTTCTTTATCCTGAATCTTT-GCCTTCACGTTCTCAATGGTGTCACTGGGCTCCAC 191638
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|||| ||| || || || || || | |||||||| ||||||||||| ||
Sbjct 191637 CTCCAGGGTAATGGTCTTCCCAGTGAGAGTTTTCACGAAAATCTGCATCTT 191587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314660153438465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |