Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq619 113 4e-20
seq1594 102 7e-17
>seq619
Length=304156
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||||| || || ||| | ||||| || || ||||| ||
Sbjct 191590 ATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGGAGCCCAGT 191649
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || ||| ||||| || ||||||||||| || || || ||
Sbjct 191650 GACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAG 191709
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || |||||||| ||||||| | ||| | || || ||||||
Sbjct 191710 CAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAAC 191769
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| ||| | || |||| | || || |||| ||
Sbjct 191770 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGG 191816
>seq1594
Length=294527
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || ||||||||| | || || || ||||| || ||
Sbjct 184031 CATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTTGAGCCCAG 183972
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| || || || || ||||| || || || ||
Sbjct 183971 TGACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCA 183912
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | |||||||| || |||| || | || | |||||||||||
Sbjct 183911 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGATTACAA 183852
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || || || || ||| | || | ||| | ||| || ||||||||
Sbjct 183851 CATCCAGAAAGAATCTACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGC 183803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434819972529600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |