Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq157 132 4e-26
>seq157
Length=512728
Score = 132 bits (146), Expect = 4e-26
Identities = 128/162 (79%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC-GCGAA 34623
|| ||||| | |||||||| ||||| |||||| ||||||| || ||||||||| ||||
Sbjct 348055 GACCTCCCCATCATGGCGCTGCCCCCCTGCCACGCCCTCTGTCAGTTCTACGTCTGCGAC 348114
Query 34624 TGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTT 34683
||||||||||| || ||||| || || || || | |||||||| | || ||||| ||
Sbjct 348115 -GGGGAGCTGTCTTGTCAGCTGTACCAGCGCTCCGCCGACATGGGTCTGGGCGTGCCTTT 348173
Query 34684 CAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
|||||| || || ||||| || ||||| |||||||| || ||
Sbjct 348174 CAACATCGCCAGCTACGCACTTCTCACCTACATGATTGCACA 348215
Score = 132 bits (146), Expect = 4e-26
Identities = 128/162 (79%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || |||||||| ||||| || ||||| || || |||||||| ||||| || | |||
Sbjct 348215 TGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGCACGCCCAGACCC 348156
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC-GACGTAGAATTG 6738
||||| | || || || || ||||| || ||||||||||| |||| ||||||||| ||
Sbjct 348155 ATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCC-GTCGCAGACGTAGAACTG 348097
Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||| |||||| ||||| |||||||| | ||||| ||
Sbjct 348096 ACAGAGGGCGTGGCAGGGGGGCAGCGCCATGATGGGGAGGTC 348055
Score = 104 bits (114), Expect = 2e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
|| |||||||||||||| || ||||||| || ||||| |||||||| | ||| ||| ||
Sbjct 347193 GGAGTGAAGATCTGGGATGCCAACGGGTCCCGTGACTTCCTGGACAACCTGGGCTTCACA 347252
Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441
|||||||||| || |||| || || || || ||||| ||||| |||||||| ||
Sbjct 347253 GAGAGGGAGGAGGGGGATCTGGGACCTGTGTATGGTTTCCAATGGAGGCACTTTGGTGCA 347312
Query 34442 GAGTA 34446
|||||
Sbjct 347313 GAGTA 347317
Score = 104 bits (114), Expect = 2e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
||||| || |||||||| ||||| ||||| || || || || |||| || |||||||||
Sbjct 347317 TACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCCCTCCTCC 347258
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| || ||| ||| | |||||||| ||||| || ||||||| || ||||||||||||
Sbjct 347257 CTCTCTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATCCCAGATCTTC 347198
Query 7019 ACCCC 7023
|| ||
Sbjct 347197 ACTCC 347193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448160952615600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |