Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1594 102 6e-17
seq619 102 6e-17
>seq1594
Length=294527
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||| || |||||||| |||
Sbjct 184030 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 183971
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | || || || || | || || || ||
Sbjct 183970 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAGGATAAGGAGGGCATCCCCCCTGACCA 183912
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||||||||| || ||||| || | |||||| | |||||||||
Sbjct 183911 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGATTACAA 183852
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || ||||| || ||
Sbjct 183851 CATCCAGAAAGAATCTAC 183834
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || || ||||||||||| || ||||| ||||| || || || || ||
Sbjct 188453 AAGATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCC 188394
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| |||| ||| |||| | || || || || || || | || || ||
Sbjct 188393 AGTGACACCATTGAGAATGTTAAGGC-CAAGATCCAGGATAAGGAGGGCATCCCCCCTGA 188335
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||| | | || |||||||| || || |||||||| | ||||| | || ||
Sbjct 188334 CCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTA 188275
Query 23787 CAACATACAAAAAGAGTCCACA 23808
|||||| || ||||| ||||||
Sbjct 188274 CAACATCCAGAAAGAATCCACA 188253
>seq619
Length=304156
Score = 102 bits (112), Expect = 6e-17
Identities = 145/203 (71%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 23606 TTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664
||||| |||||||||||||| ||||| ||||| || || || || || || || || ||
Sbjct 191584 TTAAAGATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGGAG 191643
Query 23665 TCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724
||| ||||| |||| | | || ||| ||| || |||||||| | || ||
Sbjct 191644 CCCAGTGACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCT 191703
Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784
|| || ||| | | || ||||| |||||||| |||||||| | ||||| | ||
Sbjct 191704 GACCAGCAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGAC 191763
Query 23785 TACAACATACAAAAAGAGTCCAC 23807
|||||||| || || ||||||||
Sbjct 191764 TACAACATCCAGAAGGAGTCCAC 191786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337935016597340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |