Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq157 136 3e-27
seq3511 93.3 3e-14
>seq157
Length=512728
Score = 136 bits (150), Expect = 3e-27
Identities = 128/163 (79%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || || | ||| || |||||||| ||||| || | ||||||||||||||| || |||
Sbjct 348227 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 348168
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || |||||||| | || | |||||| ||||| || || ||||| |||||||
Sbjct 348167 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTCGCAG 348108
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGA 29876
||||| |||||||| | ||| ||||| || || || |||||||
Sbjct 348107 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATGA 348065
Score = 120 bits (132), Expect = 2e-22
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||||||| ||||| || ||||| |||||||| || ||||| ||||| | ||||
Sbjct 347305 AAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCCCTCCTCCCTCTCTGTGAAG 347246
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| ||||||| ||||| | ||| |||||||| ||||||||||| || || |||||
Sbjct 347245 CCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATCCCAGATCTTCACTCCTTTCTCT 347186
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
|| ||||| |||| ||||| || ||
Sbjct 347185 GACAGCTCCTTGGCATTTGTTGATCC 347160
>seq3511
Length=43870
Score = 93.3 bits (102), Expect = 3e-14
Identities = 77/94 (82%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||||||||||||||| | ||| | |||| || |||| || || ||||| || ||||| ||
Sbjct 34930 CTCCCTGCTGAGGACGATGTTGATCCTGCCTTTCAGTGGCCTGTTCTTCTCTGGGATTGA 34989
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTC 114382
|||||| ||||| || ||||| |||||||| |||
Sbjct 34990 GAACCAGGTCTTCCTGCCCATGATCACCACATTC 35023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406073578186030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |