Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq406 383 2e-101
seq541 87.8 2e-12
>seq406
Length=364117
Score = 383 bits (424), Expect = 2e-101
Identities = 1243/1917 (65%), Gaps = 25/1917 (1%)
Strand=Plus/Minus
Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165
||||| ||||| || || || || || ||||| |||| || || || ||||| || ||
Sbjct 267903 AGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTG 267844
Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225
||||| || | || | || || ||||| |||| || || || || || || || |||
Sbjct 267843 CTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGC 267784
Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285
|| || |||| || | || || || | || ||| | ||| || || || ||
Sbjct 267783 ATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGC 267724
Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345
||||| ||||| || || | ||| ||||| | ||||| || || || || ||
Sbjct 267723 TTCCAGTCCCACAGGTCGGTCGGTGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTG 267664
Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAA 77402
|| || || | || || || || || || |||| | || ||||| ||
Sbjct 267663 CTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCTG---CGGCGAGTTCGCAG 267607
Query 77403 CTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCT 77462
|| || |||| || ||| || || || ||||| |||| | ||||| || |||
Sbjct 267606 CTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCT 267547
Query 77463 TCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCA 77522
|| || || ||||||| | | || || |||||||| || | ||||| || ||
Sbjct 267546 TCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCG 267487
Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582
|| || || || || || | ||| ||||| | | ||||| || | || || |||||
Sbjct 267486 ATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTG 267427
Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGA 77642
||||| || || || ||||| ||| | || | ||| || ||| || ||
Sbjct 267426 ATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTG 267367
Query 77643 AAATCAAATCTTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAA 77699
|| || || | | ||| | || ||||||| | || || || || || || ||
Sbjct 267366 AAGTCGAAAGTCCGCTCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAG 267307
Query 77700 ACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTG 77759
|| || ||||| | | ||| || | | | ||| || || || || || ||||||
Sbjct 267306 ACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTG 267247
Query 77760 ATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAAC 77819
|| |||||||| || || ||||||||||| | ||||| | |||||| || || || |
Sbjct 267246 ATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAG 267187
Query 77820 GGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTAT 77878
|| ||||||||||| |||| || ||||| || | | ||||| | || || || |
Sbjct 267186 GGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGA-GCTGCTGCGCCTTCAC 267128
Query 77879 CATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCC 77938
|| || | || || | |||||| || || ||| || || || |||||
Sbjct 267127 CACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCC 267068
Query 77939 CCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTC 77998
||| || |||| ||||| || || | || |||||||| |||||||| | ||
Sbjct 267067 CCAGCACTCGTCCAGCCCAGGACACTCGCTGGGACACATCAAGGACCAGTC--CTGGTTG 267010
Query 77999 CTTA--ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 78056
||| |||| ||||| || || || || ||||| | || || || |||| || |
Sbjct 267009 CTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCT 266950
Query 78057 CTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGC 78116
|| || || || |||||||| ||||| || || || || || || | | || | |||
Sbjct 266949 CTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGC 266890
Query 78117 CATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATAT 78176
|| ||||| || || || || | | || |||| || || || ||||| || | ||
Sbjct 266889 CACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAG 266830
Query 78177 CTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTT 78236
| || ||||| || |||||||||| ||| || | | ||||| || | || || ||
Sbjct 266829 CGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTG 266770
Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCC 78296
|| | ||| || ||||| | | || || || | | | || || || || ||
Sbjct 266769 CCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCG 266710
Query 78297 ATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356
||| || || || ||||| | |||| || |||||||| || || || ||||| |||
Sbjct 266709 GACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCC 266650
Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416
||||| ||| || || ||||| |||| || | | || || || || || |
Sbjct 266649 TTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGG 266590
Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476
|||||||| || || || ||||| || || || || || ||||| || || || || |
Sbjct 266589 GTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCG 266530
Query 78477 TCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCA 78536
|| ||||| | || || || |||| || | ||| | ||| ||||| || | ||
Sbjct 266529 TCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCG 266470
Query 78537 ACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAG 78596
|| || || || |||| || ||| || |||| ||| || ||||| || ||
Sbjct 266469 GCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAG 266410
Query 78597 TTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTA 78656
||||| || || ||||| |||||||| || ||||| || || |||| || |
Sbjct 266409 TTGTAGGAGAAATCTCTGTCGTAAATGATGGAGGAATTGAGGCGGTCCTTGTTTTCCATG 266350
Query 78657 ACAATATCCATGACAGTAGTTGAA-ATAATAGGAGATCGTACACCATTTTT---AGGATT 78712
|| || || | | | ||| | || || ||||| | | || || ||| ||
Sbjct 266349 ACGATGTCGA-GCGTCTCCTTGGAGATCATGGGAGAGTGG---CGTTTGTTCAGAGGGTT 266294
Query 78713 AACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAG 78772
|| ||| || | |||||||| || || || || | || || || |||||||| ||
Sbjct 266293 GACGTAGGCGAACAGGTCTTCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAG 266234
Query 78773 ATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT 78832
|| || || || || || || || || || || || || || |||| || || ||
Sbjct 266233 GTTGGAGACGGCAATCCTCGCGGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGT 266174
Query 78833 GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCC 78892
||| || || || ||||||| | || | ||| | || ||||| || | || | ||
Sbjct 266173 GGCCGCGATCTCCGCCGCTAGCGTGTCAAGCTCCACGGTGGTGACGCCGCTGTACAAGCC 266114
Query 78893 TTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACA 78952
|| || || ||||||| ||| | | ||||| ||||| || | ||||| || || ||
Sbjct 266113 CTGGATCACCTTCATGGTGATCTGAGCTGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA 266054
Query 78953 TAATTTTCTA-ATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008
|| |||| || || || ||||||||||| || || || ||||| || ||||
Sbjct 266053 -AAGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGCCCAT 265998
>seq541
Length=321934
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || || || || | || ||||| || || || ||||| || || ||||| || |||
Sbjct 162375 GTGCCGGCGTTGAACAGGGTAGGAGAGGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 162434
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|||||||||| ||||| || ||||| || ||||| || || || || | ||||| |
Sbjct 162435 TATGTTTCAACAGCTGCATCAATGTCTTCTTTGTGAATCCCGACTGCCACTCTCATCAGC 162494
Query 78519 ATATGCTGAGGTCTTTCA 78536
|| ||||| ||||| |||
Sbjct 162495 ATGTGCTGGGGTCTCTCA 162512
Score = 86.0 bits (94), Expect = 9e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792
||||| || || ||||| || | ||||| |||||||||||||| |||||| |||| |
Sbjct 160858 ATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTCTTCCTG 160917
Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852
||||| | |||||| || || || |||| || || || || |||| || ||||| ||
Sbjct 160918 TTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTGCGACTCGATGATG 160977
Query 77853 GATTTCCAGA 77862
| | |||||
Sbjct 160978 GCGTACCAGA 160987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694511587767200
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