Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq406 385 7e-102
seq541 96.9 5e-15
>seq406
Length=364117
Score = 385 bits (426), Expect = 7e-102
Identities = 1265/1953 (65%), Gaps = 25/1953 (1%)
Strand=Plus/Minus
Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715
||||| ||||| || ||||||| | ||| || | | | ||||| ||||| ||
Sbjct 267948 TTCTTCATCTCCTCGTTCCACAGGCCACGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTG 267889
Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775
|| || || || ||||| |||| || || || ||||| || || ||||| || | ||
Sbjct 267888 ACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCG 267829
Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835
| || || ||||| |||| || || || || || || || ||||| || |||| ||
Sbjct 267828 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGC 267769
Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895
| || || || | || ||| | ||| || || || || ||||| ||||| ||
Sbjct 267768 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 267709
Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955
|| | ||| ||||| | ||||| || || || || ||||| || ||
Sbjct 267708 TCGGTCGGTGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGATGGGCGAGCCC 267649
Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015
| || || ||||| | ||| || | | || |||||||| || ||||| | || ||
Sbjct 267648 TCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCG 267589
Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075
| || || || ||||| |||| | || || || ||||| | || || || |||
Sbjct 267588 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGA 267529
Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135
| | | || || || ||||| || || ||||| || || || || || || || ||
Sbjct 267528 TGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGG 267469
Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195
| ||| ||||| | || ||||| || | ||||| ||||| || || || || || |||
Sbjct 267468 CGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGTTG 267409
Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255
|| ||| | || | ||| || ||| || || || || || | | |||
Sbjct 267408 AGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCT 267349
Query 76256 ATC---ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--TAG 76310
| || |||| || || || || || || || || || ||||| ||||| | | |
Sbjct 267348 GGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTG 267289
Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370
| ||| || | | | ||| ||||| || || || || ||||| || || || || |
Sbjct 267288 C--TGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCT 267231
Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430
| ||||||||||| |||| || | |||||| || || | | || || || |||||
Sbjct 267230 GCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGG 267171
Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTA--TC 76487
|||| || ||||| || | | ||||| | || || || | | || ||
Sbjct 267170 TCTGGGACTCGATGATGGCGTACCAGA-GCTGCTGCGCCTTCACCACCCTCTTCACCCTC 267112
Query 76488 GCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547
|||| ||| ||||| || || | | || || || |||||||| || ||||
Sbjct 267111 CCTTCCTTCT--CATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCA 267054
Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT--AACCCGTTT 76605
|||||||| || | ||||||||||| ||||| | || || ||| || | ||
Sbjct 267053 GCCCAGGACACTCGCTGGGACACATCAAGGACCAGT--CCTGGTTGCTTTCCACTCTCTT 266996
Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665
||| || || || || ||||| | || || || |||| || ||| | || || ||
Sbjct 266995 CATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTT 266936
Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725
|||||| ||||| || || || ||||| || | | || | ||||| ||||| || ||
Sbjct 266935 TCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTA 266876
Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785
|| || | | || |||| || || || ||||| || | || | || ||||| ||
Sbjct 266875 CATGGCAAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTT 266816
Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845
|||||||||| ||| || | | ||||| || | || || || || | ||| || ||
Sbjct 266815 GTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCT 266756
Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905
||| | || || || | | | ||| || || || || || || || ||
Sbjct 266755 TCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAG 266696
Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965
|| || | |||| ||||| |||||||| || || || || ||| ||||| ||| ||
Sbjct 266695 CGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCAAGCAG 266636
Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025
|| ||||| |||| || | | || || || || || | || ||||| || ||
Sbjct 266635 GAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTG 266576
Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085
|||||||| || || || || || ||||| || || || | || || || || |
Sbjct 266575 GGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCC 266516
Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145
|| || || || | || | ||| | ||| ||||| || || || | || ||
Sbjct 266515 GTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTT 266456
Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 77205
|| |||| || ||| || |||| ||| || ||||| || ||||||| || || ||
Sbjct 266455 GATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAGGAGAAATC 266396
Query 77206 TCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGAC 77265
||| |||||||| || ||||| || |||||| | || | || || || ||
Sbjct 266395 TCTGTCGTAAATGATGGAGGAATTGAGGCGGTCCTTGTTTTCCATGACGATGTC---GAG 266339
Query 77266 AGT---GGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAA 77322
|| | || || || ||||| | | || ||| || || ||| || |
Sbjct 266338 CGTCTCCTTGGAGATCATGGGAGAGTGGCGTTTGTTCAGAGGGTTGACGTAGGCGAACAG 266279
Query 77323 GTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTAT 77382
||||||||| || ||||| || | || || || |||||||| || || || ||||| ||
Sbjct 266278 GTCTTCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAGGTTGGAGACGGCAAT 266219
Query 77383 TCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGC 77442
|| || || || || || ||||| || |||| || || |||||| || || || ||
Sbjct 266218 CCTCGCGGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGTGGCCGCGATCTCCGC 266159
Query 77443 CGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 77502
||||| || || | || | || || || ||| | || | || || || || |||||
Sbjct 266158 CGCTAGCGTGTCAAGCTCCACGGTGGTGACGCCGCTGTACAAGCCCTGGATCACCTTCAT 266099
Query 77503 GGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT-AATAC 77561
|| || | ||||| ||||| || | ||||| || || || || |||| || |
Sbjct 266098 GGTGATCTGAGCTGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA-AAGCTTCTGGATGC 266040
Query 77562 GAGATGTGATTTTATCAAACATGACATTCTCCT 77594
| || ||||||||||| |||||||| |||||
Sbjct 266039 GGGAGGTGATTTTATCGAACATGACGCGCTCCT 266007
>seq541
Length=321934
Score = 96.9 bits (106), Expect = 5e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || || || |||| |||||||| || ||||||||||| || || ||||| || |||
Sbjct 162375 GTGCCGGCGTTGAACAGGGTAGGAGAGGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 162434
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
|||||||||| | |||| || || || || ||||| || || || || | ||||| |
Sbjct 162435 TATGTTTCAACAGCTGCATCAATGTCTTCTTTGTGAATCCCGACTGCCACTCTCATCAGC 162494
Query 77114 ATATGCTGAGGTC 77126
|| ||||| ||||
Sbjct 162495 ATGTGCTGGGGTC 162507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712773054033600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |