Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq619 163 7e-35
seq1594 156 1e-32
>seq619
Length=304156
Score = 163 bits (180), Expect = 7e-35
Identities = 162/208 (78%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| |||||||||||||||||||| || || || || ||||| ||||||| ||| || |
Sbjct 191593 CAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGG--AGCCCAGTG 191650
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| || |||||||||||| |||||||| || ||||| |||||||
Sbjct 191651 ACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAGC 191710
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| |||| ||||| || || |||||||| |||||||| | || || | || || |||
Sbjct 191711 AGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAACA 191770
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 191771 TCCAGAAGGAGTCCACCCTCCACCTGGT 191798
>seq1594
Length=294527
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || ||||| |||||||| ||||||||| | |||
Sbjct 184483 CAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAACCCAGCGAC 184424
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||||||| || || ||||| || || || ||||| || ||||||||
Sbjct 184423 ACCATTGAGAACGTCAAAGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCAGCAG 184364
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| |||||||| ||||| |||||||| | || || | || || || ||
Sbjct 184363 AGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAATATC 184304
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||||||||| || || ||||||||
Sbjct 184303 CAAAAAGAATCCACCCTCCATCTTGT 184278
Score = 138 bits (152), Expect = 3e-27
Identities = 157/209 (75%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || ||||| || ||||| |||||||| ||||| || || |||
Sbjct 188219 CAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTTGA--GCCCAGTG 188162
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| || || ||||| || || || ||||| || |||||||
Sbjct 188161 ACACCATTGAGAACGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCAGC 188102
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| |||||||| ||||| |||||||| | || || | || || |||
Sbjct 188101 AGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAACA 188042
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTT 178130
|||| || || || || || || ||||||
Sbjct 188041 TCCAGAAGGAGTCCACCCTCCACCTTGTT 188013
Score = 122 bits (134), Expect = 2e-22
Identities = 153/208 (74%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || ||||| || || || |||||||| ||||| || || |||
Sbjct 184255 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGA--GCCCAGCG 184198
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| ||||| || || || ||||| || |||||||
Sbjct 184197 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAGC 184138
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || ||||| |||||||| | || || | || || |||
Sbjct 184137 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACA 184078
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 184077 TCCAGAAGGAGTCCACCCTTCACCTGGT 184050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203451970097370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |