Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq21 89.7 5e-13 >seq21 Length=25773841 Score = 89.7 bits (98), Expect = 5e-13 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 16982 AATC-CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCG 17040 |||| ||||||||| |||||| || ||||| || |||| ||||||||| |||| Sbjct 1860920 AATCACCTCGTCTCGGCTGATGAGCTCGTTGCTGAAGGTCAGGCCGGGCATCAGGCCTCT 1860861 Query 17041 TTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 ||||| | ||| || || ||||||||||| ||||| ||||| || ||||| |||| Sbjct 1860860 CTTCTTCAGCCAGAAGATGGCGGCGAACGAACCAGAGAAGAAGATTCCCTCCACGG 1860805 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || | |||||| ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 1860517 ATGTAGGTGTTGATGAGCAGGCTGTACATCTCAGAGTGGATGTTCTCCATGGCGATCTGG 1860458 Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318 || ||||| || || | ||| |||| Sbjct 1860457 AAGCCGTAGAAACACCTGGCCTCCG 1860433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517527692922240