Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq20 167 3e-36 >seq20 Length=26385442 Score = 167 bits (184), Expect = 3e-36 Identities = 145/180 (81%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| ||||| | ||| || | ||||||||| || || | ||||||||| |||||||| Sbjct 22733545 CTTGAGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAA 22733604 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||| ||||| |||||||| | ||||||||||||||||| ||||| ||||||||| | Sbjct 22733605 AGGCACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTC 22733664 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 ||||||||||| || ||| ||||||||| ||||| |||||| ||| ||||| || Sbjct 22733665 GCAGACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATGATGGGGAGGTCTGC 22733724 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/156 (74%), Gaps = 8/156 (5%) Strand=Plus/Plus Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 |||| |||| | || || ||||||||||| ||||| || || || || ||||| ||||| Sbjct 22734434 GTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCC 22734493 Query 146094 GGGCTCCCTGTGCCCCAGCCCGGCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGT 146149 |||||| | | | |||| || | |||||||| |||||||||||||||| Sbjct 22734494 CTCCTCCCTCT----CTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCGT 22734549 Query 146150 CCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 |||||||||| || || || | || ||||| |||| Sbjct 22734550 CCCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGG 22734585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590056383342720