Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq8 159 2e-34 >seq8 Length=27946405 Score = 159 bits (176), Expect = 2e-34 Identities = 187/250 (75%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 ||| ||| ||||||| ||||||||||| ||||| | | | ||| || || | || ||| Sbjct 9716474 CCTCCAAGGAGGACTGCAACATCATCACTGACACAGCC-GCCAAGCTCGAGCGCAGCGGC 9716416 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 ||||||||||| || |||| || |||||||| || || ||||| |||||| | | ||| Sbjct 9716415 TTCTACTGGGGCCCGCTGGGAGTGGAGGAGGCCCACCGCATGCTCCGCAACGCCCCGCTG 9716356 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCAC 91993 ||||||| || || || || ||| |||| ||||||||||| ||||| ||||| |||||| Sbjct 9716355 GGCAGCTACCTTATCCGCGACAGCCGGCAGAAGGACGTCTTCTTCACCCTGTCCTATCAC 9716296 Query 91994 TCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTTGGCT 92053 || ||||||||||| ||| | || || |||||| | || | || || |||| Sbjct 9716295 GACAAGAAAGGACCCGTCAGCGTGCGCATCGACTACAAGCAGCAGAAGTTCTCTCTGGCC 9716236 Query 92054 GGGAGCAAAC 92063 || | | ||| Sbjct 9716235 GGCAACCAAC 9716226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356221582459504