Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq20 123 2e-23 >seq20 Length=26385442 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||||| |||||||||| || || | |||||| ||||| || ||||| ||||| || || Sbjct 22734431 CATGTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATC 22734490 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || ||||| | |||||| || |||| ||||| | ||| || |||||||| Sbjct 22734491 CCCCTCCTCCCTCTCTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCGTC 22734550 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||||||||| || || ||||| || ||||| |||| ||||| || || Sbjct 22734551 CCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGGCATTTGTTGATCC 22734598 Score = 104 bits (114), Expect = 2e-17 Identities = 121/162 (75%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || |||| || || |||||||| ||||| || ||||||||||||||| || || Sbjct 22733549 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 22733608 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | ||||||| | | || | |||||| |||||||| || ||||| |||||| Sbjct 22733609 ACGCCCAGACCCATGT-CGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTCGCA 22733667 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 ||||| |||||||| | || || ||| || || || || || Sbjct 22733668 GACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCAT 22733709 Score = 86.0 bits (94), Expect = 4e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 25422 TTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCT 25481 ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 22733393 TTCAGAGGTTCGACGTGATTGAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAAGTCA 22733452 Query 25482 CCCGG 25486 || || Sbjct 22733453 CCGGG 22733457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340126125458064