Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq20 102 7e-17 >seq20 Length=26385442 Score = 102 bits (112), Expect = 7e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || |||| || |||| ||| || || | || | |||||||| ||||| ||||| Sbjct 22733549 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 22733608 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||||||||| | || | ||| |||||||||||||| ||||| ||||| Sbjct 22733609 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTCGCAG 22733668 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || || || ||||| | ||| ||||| || |||||||| Sbjct 22733669 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCAT 22733709 Score = 100 bits (110), Expect = 3e-16 Identities = 118/155 (76%), Gaps = 6/155 (4%) Strand=Plus/Plus Query 20521 GTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||| |||| | || |||||||||||||| |||||||| || |||||||||| |||||| Sbjct 22734434 GTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCC 22734493 Query 20581 CTC--CCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCC 20638 ||| || ||| || | | ||| | | ||||||| || | ||| || || |||| Sbjct 22734494 CTCCTCCCTCTCTGTG--AAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCGTCC 22734551 Query 20639 CATATCTTGACTCCTGTTCT-TGAAAGCTCCCTGG 20672 || ||||| |||||| |||| ||| |||||| ||| Sbjct 22734552 CAGATCTTCACTCCT-TTCTCTGACAGCTCCTTGG 22734585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441357528501120