Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq22 134 1e-26 seq14 82.4 6e-11 >seq22 Length=25248790 Score = 134 bits (148), Expect = 1e-26 Identities = 133/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || | |||||| |||||| Sbjct 3462082 AGGTCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTCTGATGAACCCATCA 3462141 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| ||||| ||||| | |||||||| |||||||||||| | || ||||||||| Sbjct 3462142 AGCATATCCTGCAACTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGATCGTTTTTG 3462201 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || || || || || || || || |||| ||||||| Sbjct 3462202 GTATCAAACTGGGTCTGAGCACCAAGTTCACAACCAAAAAACTTGGTCGGGT 3462253 >seq14 Length=28338960 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || |||||||| || | |||||||||||||| ||| | || |||||| Sbjct 16346313 AACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGCCC 16346372 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | || ||| ||||| || || || ||| | ||| || Sbjct 16346373 AGCGACACCATTGAGAACGTCAAAGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGAC 16346432 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | ||| || || |||||||| |||| | | || || | || ||| Sbjct 16346433 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTAC 16346492 Query 110450 AACATTCAAAAAGAATCTAC 110469 || || ||||||||||| || Sbjct 16346493 AATATCCAAAAAGAATCCAC 16346512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412827672788624