Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq14 82.4 7e-11 >seq14 Length=28338960 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/203 (69%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 |||||||| | ||||| || || | ||||| ||| | ||||| | || || || || Sbjct 16346313 AACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGCCC 16346372 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 | ||| || || ||| | || ||| || || ||||| ||||| || || || || Sbjct 16346373 AGCGACACCATTGAGAACGTCAAAGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGAC 16346432 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATT 25349 ||||| || || || | | ||| || || || ||||||| | | |||| | | | Sbjct 16346433 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTG--ACT 16346490 Query 25350 ACAATATTCAAAAAGAATCCACC 25372 ||||||| ||||||||||||||| Sbjct 16346491 ACAATATCCAAAAAGAATCCACC 16346513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445078999733760