Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq20 91.5 1e-13 seq21 87.8 1e-12 >seq20 Length=26385442 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 41076 TGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGAC 41135 |||||||| ||||| ||| | || || ||||| ||||| |||| || | || | ||| Sbjct 22733682 TGTCAGTTCTACGTCTGCGACGGGGAGCTGTCCTGTCAGCTGTACCAGCGCTCCGCCGAC 22733623 Query 41136 ATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCA 41195 ||||| || || || || || ||||| || || || || || ||||| || ||||||||| Sbjct 22733622 ATGGGTCTGGGCGTGCCTTTCAACATCGCCAGCTACGCACTTCTCACCTACATGATTGCA 22733563 Query 41196 CACGTTAC 41203 ||| |||| Sbjct 22733562 CACATTAC 22733555 >seq21 Length=25773841 Score = 87.8 bits (96), Expect = 1e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 77308 CAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTT 77367 || |||||| || |||||||| | || || |||||||| |||| ||||| || ||||| Sbjct 346998 CACCCAGACCACGTCCAGCTCGGAGTTCAGCCGGTCCAGCGTCATGAAGTCGTCTTTGTT 347057 Query 77368 GACAA-CTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACT 77426 | | | |||| | | | | |||||||||||||||| | |||||| |||| ||||| Sbjct 347058 GGTGATCGGACCACCAGACTT-CAGCCTCCAGCCGTTCAGTTTCCAGGTCTTCACCCAGC 347116 Query 77427 TAGTCACACC 77436 | |||||||| Sbjct 347117 TGGTCACACC 347126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397442591821840