Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq12 104 2e-17 >seq12 Length=26439574 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || || || ||||| || Sbjct 2383097 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 2383156 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || ||| ||| ||||| || ||||||||||| | || || || Sbjct 2383157 GATACCATTGAGAACGTGAAAGCAAAGATTCAGGATAAAGAAGGCATTCTTCCTGACCAG 2383216 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| ||||||| | ||| | || || |||||| Sbjct 2383217 CAGAGACTCATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAAC 2383276 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || |||| | ||| | |||| ||||| Sbjct 2383277 ATCCAGAAGGAGTCCACCGTCCACCTGGTGCTCCGTCTCAGGGGAGGCAT 2383326 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || || || ||| | || || || || ||||| || Sbjct 2383324 CATGCAGATTTTTGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAG 2383383 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||||| || || ||| ||||| || ||||||||||| | || || || Sbjct 2383384 TGATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCTTCCTGACCA 2383443 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || |||||||| ||||||| | ||| | || || ||||| Sbjct 2383444 GCAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAA 2383503 Query 27167 CATTCAAAAGGAGTCGACC 27185 ||| || |||||||| ||| Sbjct 2383504 CATCCAGAAGGAGTCCACC 2383522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434903351823360