Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq13 407 2e-108 seq14 100 4e-16 >seq13 Length=33524197 Score = 407 bits (450), Expect = 2e-108 Identities = 1267/1949 (65%), Gaps = 17/1949 (1%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| ||||| || ||||||| | ||| || | | | ||||| ||||| || Sbjct 17856184 TTCTTCATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTG 17856125 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 ||||| || || ||||| |||| || || || ||||| || || ||||| || | || Sbjct 17856124 ACAATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCG 17856065 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 17856064 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGC 17856005 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | |||||| | ||| || || || || ||||| ||||| || Sbjct 17856004 AGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 17855945 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || ||||| | ||||| || ||||| || ||||| | || || Sbjct 17855944 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTGCTGACGGGCGAGCCC 17855885 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | || || ||||| | ||| || | | || || ||||| || ||||| | || || Sbjct 17855884 TCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGCTCGCAGCTGGCCTCCAGGGCGGCG 17855825 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 | || || || ||||| |||| | || || || ||||| | || || || || Sbjct 17855824 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGG 17855765 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 | | | || || || || || || || ||||| || || || || || || || || Sbjct 17855764 TGCCGCATCAGGATGAAGGCGTCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGA 17855705 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| ||||| | || ||||| || | ||||| || || || || || || || ||| Sbjct 17855704 CGCTTGTTGGACGTCTCGGCTTCAGGGACCGGGTAGTAGTTGATGTCGATGATCTTGTTG 17855645 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 || ||| | || | ||| || ||| || || || || || | | ||| Sbjct 17855644 AGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCT 17855585 Query 76256 ATC---ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--TAG 76310 | || |||| || || || || || || || || || ||||| ||||||| | | Sbjct 17855584 GGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCATCCTTG 17855525 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | ||| || | | | ||||||||| ||||| || || ||||| || || || || | Sbjct 17855524 C--TGGTGTACTCCACCACCTCCGTGCAGAGATTGCTGCATTTGATCGTGCCCAGGTTCT 17855467 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 ||||||||||| |||| || | |||||| || || | | || || || ||||| Sbjct 17855466 TCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGG 17855407 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTA--TC 76487 |||| || ||||| || | | ||||| | || || |||| | || || Sbjct 17855406 TCTGGGACTCGATGATGGCGTACCAGA-GCTGCTGCGCCTTTACCACCTTCTTCACCCTC 17855348 Query 76488 GCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547 |||| ||| ||||| || || | | || || || |||||||| || || | Sbjct 17855347 CCTTCCTTCT--CATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCTA 17855290 Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCA 76607 |||||||| || | ||||||||||| ||||| || | || || | |||| Sbjct 17855289 GCCCAGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCA 17855230 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667 | || || ||||| ||||| | || || ||||||| || ||| | || || |||| Sbjct 17855229 TGAACAGGTCAGGGATCCACAAGGCGTAGAAAAGATCTCTGGCTCTCTGCTCCTCCTTTC 17855170 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 |||| ||||| || || || ||||| || | | || | ||||| || || || || | Sbjct 17855169 CTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGCTCCAGGTACA 17855110 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | | || |||| || || || ||||| || | || | || ||||| || | Sbjct 17855109 TGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGT 17855050 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847 ||||||||| ||| || | | ||||| || | || || || || | || || |||| Sbjct 17855049 AAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTTC 17854990 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 | | || || || | | | ||| || || || || || || || |||| Sbjct 17854989 CCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAATGAGAG 17854930 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 | || | |||| |||||||||||||| || || || || ||| ||||| || || | Sbjct 17854929 CGCACTGCTTCAGGGTGTCATAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGA 17854870 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 | ||||| |||| || | | || || || || || | || ||||| || || | Sbjct 17854869 AGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGG 17854810 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGAT 77087 ||||||| || || || || || ||||| || || || | || || || || | | Sbjct 17854809 TGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCGGCGTCGATGTCTCGCCCGT 17854750 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147 | || || || | || | ||| | ||| ||||| || || || | || || | Sbjct 17854749 GGATCCCAACTGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGA 17854690 Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 77207 | |||| || ||| || |||| ||| || || || || ||||||| || || |||| Sbjct 17854689 TCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTC 17854630 Query 77208 TTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCA-TGACA 77266 | |||||||| || ||||| || |||||| | || | || || || | || | Sbjct 17854629 TGTCGTAAATGATGGAGGAATTGAGGCGGTCCTTGTTTTCCATGACGATGTCGAGTGTC- 17854571 Query 77267 GTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCT 77326 | || || || ||||| | | || ||| || || ||| || | |||| Sbjct 17854570 TCCTTGGAGATCATGGGAGAGTGGCGTTTGTTCAGAGGGTTGACGTAGGCGAACAGGTCT 17854511 Query 77327 TCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTA 77386 ||||| || ||||| || | || || || |||||||| || || || ||||| || || Sbjct 17854510 TCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAGGTTGGAGACGGCAATCCTC 17854451 Query 77387 GCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCT 77446 ||||| || || || ||||| || |||| || || |||||| || || ||||||||| Sbjct 17854450 GCAGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGTGGCCGCAATCTCTGCCGCT 17854391 Query 77447 AAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCT 77506 | || |||| || | || || || ||| | || | || || || || ||||||| Sbjct 17854390 AGCGTGTCTAGCTCCACGGTGGTGACGCCGCTGTACAAGCCCTGGATCACCTTCATGGTG 17854331 Query 77507 ATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT-AATACGAGA 77565 || | | ||||| ||||| || | ||||| || || || || |||| || || || Sbjct 17854330 ATCTGAGTCGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA-AAGCTTCTGGATGCGGGA 17854272 Query 77566 TGTGATTTTATCAAACATGACATTCTCCT 77594 ||||||||||| |||||||| ||||| Sbjct 17854271 GGTGATTTTATCGAACATGACGCGCTCCT 17854243 >seq14 Length=28338960 Score = 100 bits (110), Expect = 4e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || || || |||| |||||||| || ||||||||||| || || ||||| || ||| Sbjct 9812843 GTGCCGGCGTTGAACAGGGTAGGAGAGGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 9812902 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||| | |||| || || || | || ||||| || || || || | ||||| | Sbjct 9812903 TATGTTTCAACAGCTGCATCAATGTCTCCTTTGTGAATCCCGACTGCCACCCTCATCAGC 9812962 Query 77114 ATATGCTGAGGTC 77126 || ||||| |||| Sbjct 9812963 ATGTGCTGGGGTC 9812975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712909732469760