Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 1e-13 >seq14 Length=28338960 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155 ||| ||||| || |||||||| || | |||||||||||||| ||| |||| ||| || Sbjct 16346312 AAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGCC 16346371 Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215 |||||| | ||| | || ||| || || || || || ||| | ||| || Sbjct 16346372 CAGCGACACCATTGAGAACGTCAAAGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGA 16346431 Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111275 || || ||||| || | ||| || || || |||||||| || || | || || Sbjct 16346432 CCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTA 16346491 Query 111276 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 ||||| ||||||||||| || || || | || | |||||| | ||||||| Sbjct 16346492 CAATATCCAAAAAGAATCCACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGCA 16346544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421796970199168