Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq238055 91.5 3e-13
seq444848 89.7 1e-12
seq253432 89.7 1e-12
seq238054 89.7 1e-12
seq192246 89.7 1e-12
seq140745 89.7 1e-12
seq138847 89.7 1e-12
seq113143 89.7 1e-12
seq41456 89.7 1e-12
seq3370 89.7 1e-12
seq8517 84.2 5e-11
seq2548 84.2 5e-11
>seq238055
Length=523
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 374 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 433
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 434 CCCCACGTTGGGC 446
>seq444848
Length=522
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 148 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 89
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 88 CCCACGTTGGGC 77
>seq253432
Length=930
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 147 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 88
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 87 CCCACGTTGGGC 76
>seq238054
Length=789
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 650 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 709
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 710 CCCACGTTGGGC 721
>seq192246
Length=1030
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 882 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 941
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 942 CCCACGTTGGGC 953
>seq140745
Length=1021
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 149 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 90
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 89 CCCACGTTGGGC 78
>seq138847
Length=925
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 779 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 838
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 839 CCCACGTTGGGC 850
>seq113143
Length=821
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 149 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 90
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 89 CCCACGTTGGGC 78
>seq41456
Length=1434
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 147 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 88
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 87 CCCACGTTGGGC 76
>seq3370
Length=3486
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 149 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 90
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 89 CCCACGTTGGGC 78
>seq8517
Length=384
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGT-CGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||| |||||||||| ||||||||| ||||| ||||||| |||||||||||||||
Sbjct 153 GCCCGGCTAGCTCAGTTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 212
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 213 CCCCACGTTGGGC 225
>seq2548
Length=522
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGT-CGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||| |||||||||| ||||||||| ||||| ||||||| |||||||||||||||
Sbjct 85 GCCCGGCTAGCTCAGTTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 144
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 145 CCCCACGTTGGGC 157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1050701676958260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |