Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_000866.4
Length=168903
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 194 2e-44
seq506238 143 3e-29
seq351952 100 3e-16
seq487923 98.7 1e-15
seq509673 96.9 4e-15
seq510909 89.7 6e-13
seq326422 89.7 6e-13
seq511551 84.2 2e-11
>seq449735
Length=3187
Score = 194 bits (214), Expect = 2e-44
Identities = 496/742 (67%), Gaps = 25/742 (3%)
Strand=Plus/Minus
Query 141347 TTTGTTGGAATAGCAATTTCACAGCACAAGTTACTCTGACGAATAGGTGCCTTTTCACGA 141406
|| ||||| | |||||||| | || || ||| || |||||||||||| || | |
Sbjct 755 TTAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCA 696
Query 141407 ATAAACGGAGTATAGTTATTCGTATTATCAATGAACTGCACATAAATCCTTGCTGTTCCT 141466
|| ||||| | | |||| | |||| | || | ||||| | | || | |
Sbjct 695 ATGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTT 636
Query 141467 GAACGTTCAGTCATGAGCAA---TTCA-AATAGTTCACGGGCTTTAATACGCTTTTTACG 141522
| |||||| || |||| || | || |||||| |||||||| || ||||||||
Sbjct 635 GCACGTTCT----TGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACG 580
Query 141523 AAT--ATTAGGGTCTTTTTCTGCTGCTTCGTATAATTCACGG-AAACG-GTCTTGGTCTT 141578
||| ||| | |||| ||| | | | |||| | || |||| |||||||||||
Sbjct 579 AATTGATTCG--TCTTGTTCGTATTTTAC--ATAAAGCGCGTCAAACTCGTCTTGGTCTT 524
Query 141579 TAAAATAAGAATAATAAAGCTCGCCACCCATTTCATGCGGACTGAACAAAGTAATGTAAT 141638
|||| | | || ||||| ||| || ||| || || ||||| |||||||| |
Sbjct 523 CAAAAAATGCATCGTAAAG---GCCTGGCACATCAGAGGGGCTAAACAAGGTAATGTAGT 467
Query 141639 CGTTTTTTCCAAAACGTTCCATCATCAAATCATTCAGTTGAACACCATAATCCATATGAC 141698
||| ||| ||||| ||| | | ||| | || || || ||||| | |||||
Sbjct 466 CGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGAC 407
Query 141699 GAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCA 141758
| | |||||| || || || || ||||||||| | || | || ||||| ||||| |
Sbjct 406 GCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTA 347
Query 141759 AATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGAATTCCACCCTGTGAACA 141816
||||||||| || || | ||| || || ||||||||||| | || || || |||||
Sbjct 346 AATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACA 289
Query 141817 TGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTATGGCGTACTTC 141876
|||||| || || ||||| || || ||||||||||| ||| |||||| ||||
Sbjct 288 GCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTC 229
Query 141877 ACCCATGCCAATCTTAGAACCTTCGGCACGAATCATACCAACGTTAATACCAATTCCAGC 141936
|| ||| ||| | ||| |||||||| ||| ||||||| ||||| || ||
Sbjct 228 GCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGC 169
Query 141937 GCGTTTAGAGATATATTCAACAATTGAAGCAGAAGCCTTATTGATAGACTTCAATG-AAT 141995
|||| || | |||| |||||||| || || | || || || |||| | |
Sbjct 168 ACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGA-ATCAAGGCTGT 110
Query 141996 CTCCTGCCTCAATAACAACACATGAACTAAACTGTCGAGTCGGAGTACGACAACCAGCCA 142055
| || ||| || | ||||| || |||||||| || || || |||||| ||| ||||
Sbjct 109 CGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCA 50
Query 142056 TAATAGGAGTTGGCAATGAAAT 142077
|||| || || || | ||||||
Sbjct 49 TAATTGGCGTAGGTAGTGAAAT 28
>seq506238
Length=275
Score = 143 bits (158), Expect = 3e-29
Identities = 142/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 63556 ATTACAAACTTTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 63615
||||||| |||| ||||| ||||| | | ||||| |||| ||||| || || | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 63616 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 63675
||||||| || ||||| ||||| |||||||| || || | || ||||||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 63676 GCTTAACTGCATCTTCCAGAGTTTCATGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 63735
| ||||| |||||||||| |||||| |||| | || || ||||| | ||||||||||
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 63736 CTTC 63739
||||
Sbjct 218 CTTC 221
>seq351952
Length=416
Score = 100 bits (110), Expect = 3e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 63570 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 63629
||||||||||| | ||| || || ||| ||||| | ||| | |||||||| || |||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 63630 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 63689
|| ||||| |||||||| || || | || ||||| || || |||| | | ||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 63690 TCCAGAGTTTCATGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 63742
| ||||| | || || |||||||| | ||||||||||||||||||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206
>seq487923
Length=1072
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/202 (71%), Gaps = 9/202 (4%)
Strand=Plus/Minus
Query 25646 ATACTAATTTATCTAATACGTATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 25705
||| |||||||| |||| || || |||||||| ||||||||| |||||||| ||
Sbjct 528 ATAGTAATTTAT---ATACATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472
Query 25706 CGTCATTTGAGCGCATGTTAACAACCGCATTGATT---TTCTTGTCACGAATCAGGTATT 25762
||||| ||||||| || |||| || |||| || || |||||||| | ||
Sbjct 471 CGTCACATGAGCGCTGATTGACAAT---ATAGATTAATTTATTATCACGAATAAATACTT 415
Query 25763 GTACTGTATTCGTGCACATGAAATCTGACATACCATCTTTATTATAGTCAAACTGCATAG 25822
| || |||| || || || ||||||||||| ||| |||| | ||| || ||||
Sbjct 414 GAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAG 355
Query 25823 ATGGACGAGTATAAATCATGAT 25844
| || | |||||||||||| ||
Sbjct 354 AAGGTCTAGTATAAATCATAAT 333
>seq509673
Length=441
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 141677 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 141736
|| || || |||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 141737 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 141796
|| | | |||||||| |||||||| | || ||| | || || || ||||||
Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347
Query 141797 CGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATA 141856
|| | || || ||||| || ||||||| ||||| || || |||| | || || |||
Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATA 407
Query 141857 ACACCAGTATG 141867
||| |||||
Sbjct 408 CAACCCGTATG 418
>seq510909
Length=431
Score = 89.7 bits (98), Expect = 6e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 63558 TACAAACTTTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAG 63617
|||| ||||| |||||| ||||||| || ||||| ||||||| || ||||| || |
Sbjct 339 TACATACTTTTAGTAAATGTACGAGTAATCACGTCTTGCTGCTGCTCAGGAGTGAGCGCA 398
Query 63618 TTAAAGCGAACTGCATAACCGGATACACGGAT 63649
||||||||||| |||||||| |||||||| ||
Sbjct 399 TTAAAGCGAACGGCATAACCCGATACACGAAT 430
>seq326422
Length=2068
Score = 89.7 bits (98), Expect = 6e-13
Identities = 91/115 (79%), Gaps = 4/115 (3%)
Strand=Plus/Plus
Query 72253 GCGCTCTACCAAACTGAGCTACAC--GGAGTAAATTAAATTGGAGCGGATAATGAGAATC 72310
|||||||||||| |||||||| | | | | |||| |||||||| | | |||||
Sbjct 291 GCGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATC 349
Query 72311 GAACTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGC 72364
|||| | ||||||||| ||||||| ||||||||||| |||||||||||| ||||
Sbjct 350 GAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404
>seq511551
Length=634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Minus
Query 44544 ATAATATCAGGATACATCCTTTTGCTTGCGCACTCTAGAGCAAGCTGTTTAATATCATAG 44603
||||||||||| ||||| | || || || ||||||||||| | ||||||||||| ||||
Sbjct 345 ATAATATCAGGGTACATACGCTTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAG 286
Query 44604 TTCGGATCGTCTT-TATAAAGATTAACACCTTCTTCAACGAACATAACAAGCTTAGGGAA 44662
|| || || || | | ||||| || ||||| |||| || | | ||||||||||||
Sbjct 285 TTTGGGTCTTCCTGTTTAAAG-TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAA 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536812086230960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |