Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_000935.1
Length=36524
Score E
Sequences producing significant alignments: (Bits) Value
seq520028 82.4 2e-11
seq466164 82.4 2e-11
>seq520028
Length=356
Score = 82.4 bits (90), Expect = 2e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 11267 CGAATACCCGGTGAGCATATCCCGTTAATTCCGGTCTATGGTAAGCGGTGGTTTATCGAT 11326
|| || || || || | || ||| | || || || || |||||||| |||||| | |||
Sbjct 135 CGCATTCCTGGCGATTACATACCGCTGATCCCCGTTTACGGTAAGCGCTGGTTTGTTGAT 76
Query 11327 GATATTGAGCGAGTCGAAGGTCACATAGCAAAAGCCATGGATGCCCAACGTCTGTATAAC 11386
| || ||||| | ||||||||| ||| || ||||||||||| ||||| || | |||
Sbjct 75 AACATGGAGCGCATAGAAGGTCACGCAGCTAAGGCCATGGATGCACAACGACTAGAAAAC 16
Query 11387 TTACAGGTGTCGATG 11401
|| |||||| |||
Sbjct 15 TTGATGGTGTCAATG 1
>seq466164
Length=1079
Score = 82.4 bits (90), Expect = 2e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 14644 TATTCGTGTACACAAATATGCGGATGGTGACGCAAACAAGCAGATGATGCGTTTTGACCT 14703
||||||||| || ||||| | || || ||| ||||||||||||||||| ||||| |
Sbjct 920 TATTCGTGTTCATAAATACTCAGACGGACGCGCTAACAAGCAGATGATGCGCTTTGATGT 979
Query 14704 GTTGCCTGCTTATGTCTGCTTTAATCCGCATATGGGTGGTCAATTCTTTGGTAAT 14758
|||| || | || ||| || ||||| |||| |||||| |||||||| |||
Sbjct 980 TCTGCCAGCATTTGCGATCTTAAACCCGCACATGGCTGGTCAGTTCTTTGGCAAT 1034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 116026608293064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |