Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq520028 82.4 2e-11 seq466164 82.4 2e-11 >seq520028 Length=356 Score = 82.4 bits (90), Expect = 2e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 11267 CGAATACCCGGTGAGCATATCCCGTTAATTCCGGTCTATGGTAAGCGGTGGTTTATCGAT 11326 || || || || || | || ||| | || || || || |||||||| |||||| | ||| Sbjct 135 CGCATTCCTGGCGATTACATACCGCTGATCCCCGTTTACGGTAAGCGCTGGTTTGTTGAT 76 Query 11327 GATATTGAGCGAGTCGAAGGTCACATAGCAAAAGCCATGGATGCCCAACGTCTGTATAAC 11386 | || ||||| | ||||||||| ||| || ||||||||||| ||||| || | ||| Sbjct 75 AACATGGAGCGCATAGAAGGTCACGCAGCTAAGGCCATGGATGCACAACGACTAGAAAAC 16 Query 11387 TTACAGGTGTCGATG 11401 || |||||| ||| Sbjct 15 TTGATGGTGTCAATG 1 >seq466164 Length=1079 Score = 82.4 bits (90), Expect = 2e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 14644 TATTCGTGTACACAAATATGCGGATGGTGACGCAAACAAGCAGATGATGCGTTTTGACCT 14703 ||||||||| || ||||| | || || ||| ||||||||||||||||| ||||| | Sbjct 920 TATTCGTGTTCATAAATACTCAGACGGACGCGCTAACAAGCAGATGATGCGCTTTGATGT 979 Query 14704 GTTGCCTGCTTATGTCTGCTTTAATCCGCATATGGGTGGTCAATTCTTTGGTAAT 14758 |||| || | || ||| || ||||| |||| |||||| |||||||| ||| Sbjct 980 TCTGCCAGCATTTGCGATCTTAAACCCGCACATGGCTGGTCAGTTCTTTGGCAAT 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116026608293064