Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq231358 95.1 1e-14
>seq231358
Length=2322
Score = 95.1 bits (104), Expect = 1e-14
Identities = 72/85 (85%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| ||||| |||||||| ||||||||||| || ||||| |||||||||||||| |||||
Sbjct 1033 ATGTACGTGTCGATGAGGAGGCTGTACATCTCCGAGTGGATGTTCTCCATGGCGATCTGG 1092
Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318
|| || || ||||| ||||| ||||
Sbjct 1093 AAGCCATAGAAGCAGCGGGCCTCCG 1117
Score = 93.3 bits (102), Expect = 4e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||||||||||||||| || || || || || |||| ||||||||| |||| ||||
Sbjct 628 CCTCGTCTCTGCTGATGAGCTCATTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 687
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096
| | ||| || || || ||||| |||||||| ||||| || ||||| ||||
Sbjct 688 TCAGCCAGAAGATGGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGG 738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514145959401360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |