Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_001271.1
Length=39600
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 152 1e-32
>seq512931
Length=538
Score = 152 bits (168), Expect = 1e-32
Identities = 353/525 (67%), Gaps = 38/525 (7%)
Strand=Plus/Plus
Query 37355 CCTGACCACTCTCCGTCTGTGAAGTCGGTTGGTATCACTGGTCAGT-TGACTGGTAGCCG 37413
||||||||| || || |||||||| || ||| | ||||| | || |||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 37414 TGCTGATATCATCATAGCGGATGACGTTGAGATTCCGTCTAACTCCGCAACTCAAGGTGC 37473
|||||| ||| |||| ||||||||||||||| | || ||||| | || || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 37474 CCGTGAGAAGCTGTGGACTCTGGTGCAGGAATTTGCTGCGCTTCTGAAACCGCTGCCAAC 37533
| || | || | ||||| ||||||| | |||| | ||||| || || ||
Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG---AC 183
Query 37534 TTCTCGCGTTATCTACCTTGGTACGCCTCAAACCGAAATGACCTTGTACAAGGAACTCGA 37593
|| | |||||| | || || || || |||||||||||| | |||| |||||| ||
Sbjct 184 GGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGA 242
Query 37594 AGATAACCGTGGGTACACCACAATCATCTGGCCTGCGCTCTATCCGCG---------TAG 37644
|| ||| || ||| | || | ||||||||||| | || || || |
Sbjct 243 GGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGA 299
Query 37645 CCGTGAGGAAGACTTGTACT---ATGGCGACCG------TCTGGCCC---CGATGCTCCG 37692
|| |||| ||| | || | ||| | || ||||| || | ||||||
Sbjct 300 CCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCA- 358
Query 37693 CGAAGAGTTCAACGATGGGTTCGAGATGCTCCAAGGTCAACCGACTGACCCCGTGCGCTT 37752
| ||| | | || | ||||| ||| | | || || ||||| | || ||
Sbjct 359 --AGGAGCTGGAAGACGA---CGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATT 413
Query 37753 CGATATGGAAGACCTGCGTGAGCGTGAGTTGGAATACGGTAAGGCTGGCTTCACTTTGCA 37812
|||| ||||||||||||||||| || | ||| || |||| ||||||| || | ||
Sbjct 414 CGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACA 473
Query 37813 GTTCATGCTCAACCCGAACCTGAGTGATGCCGAGAAGTACCCCTT 37857
||||||||||||||||||||| || || |||||||||||| ||
Sbjct 474 GTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTT 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125808383415288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |