Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq520772 109 1e-19 >seq520772 Length=281 Score = 109 bits (120), Expect = 1e-19 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 21461 TAACTGCATCCTCTAAATGGTCGGGTGCAAAGTGCGCATATCGCATGGTCATTTTTATAT 21520 |||| ||||| |||||||| || |||||||| || | |||| ||| || || Sbjct 183 TAACCGCATCTTCTAAATGCTCTGGTGCAAAATGTGAATATTTCATCGTATCAACAATTG 124 Query 21521 CTGTATGGCCGAGTACGCGCTGCAACACCAAAATATTACCGCCATTCATCATAAAGTGAC 21580 || || || |||| ||||| | ||||| |||||||||||||||||||||||| | || Sbjct 123 ATGCGTGACCAAGTATTCGCTGTAGCACCAGAATATTACCGCCATTCATCATAAAATAAC 64 Query 21581 TAGCGAAGGTGTGACGTAAAACGTGGGTAAGTTGTCCTGCCGGTAGTTCGATACCTGT 21638 |||| || ||||| ||||| || ||| | | ||| ||| |||| ||| | ||||| Sbjct 63 TAGCAAATGTGTGTCGTAACACATGGCTCATTTGCCCTTTGGGTAATTCAAATCCTGT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97264425841464