Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq150714 82.4 5e-11 >seq150714 Length=4870 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 102038 TATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT 102097 |||||||| ||||| ||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct 1710 TATTCTGCACCGAAGTGCCTCCACTGGAATCCGTACACGGGTCCCAGGTCGCCCTCTTCT 1651 Query 102098 CTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGC 102157 ||||| || || || ||||| | || || ||| || || || ||||| || | | Sbjct 1650 CTGTCCGTGAACCCGAGGTTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATCTTC 1591 Query 102158 ACGCC 102162 || || Sbjct 1590 ACCCC 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358937546595002