Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_001604.1
Length=39937
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 114 3e-21
seq515320 105 2e-18
>seq512931
Length=538
Score = 114 bits (126), Expect = 3e-21
Identities = 359/545 (66%), Gaps = 52/545 (10%)
Strand=Plus/Plus
Query 37768 TCCTGACCACT-CTCCTAGTGTGAAATCAGTAGGTATCACTGGTCAGT-TAACTGGTAGC 37825
|||||||||| | ||| | ||||| || || ||| | ||||| | || | |||||||||
Sbjct 9 TCCTGACCACAGCCCCTCG-GTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGC 66
Query 37826 CGTGCTGACATTATCATTGCGGATGACGTTGAGATTCCGTCTAACAGCGCAACTATGGGT 37885
||||||||||| |||||||||||||||||||| | || ||| | || |
Sbjct 67 CGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCC 126
Query 37886 GCCCGTGAGAAGCTATGGACTCTGGTTCAGGAGTTCGCTGCGTTACTTAAACCGCTGCCT 37945
|| | || | || | ||||| |||| |||| |||| | || || ||||
Sbjct 127 GCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAA------GCCT 180
Query 37946 TCCTCTCGCGTTATCTACCTTGGTACACCTCAGACAGAGATGACTCTCTATAAGGAACTT 38005
| | | |||||| | || || || ||||| || ||||| ||||| | |||||||
Sbjct 181 GACGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTT 240
Query 38006 GAGGATAACCGTGGGTACACAACCATTATCTGGCCTGCTCTGTACCCAAGGACACGTGAA 38065
||||| ||| || ||| | || | ||||||||||| | ||||| || | |||
Sbjct 241 GAGGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGG-ATGTG-- 294
Query 38066 GAGAACCTCTATTACT-----CAC----------AGCG------TCTTGCTCCTA---TG 38101
| |||| | | || ||| |||| ||| | | || ||
Sbjct 295 GCTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATG 354
Query 38102 TT--ACGCGCTG-AGTACGATGAGAACCCTGAGGCACTTGCTGGGACTCCAACAGACCCA 38158
| | | |||| | |||| ||||| | || | |||| | || ||||||||
Sbjct 355 CTCAAGGAGCTGGAAGACGACGAGAAGC-TG-------TTCTGGAAG-CCTACAGACCCT 405
Query 38159 GTGCGCTTTGACCGTGATGACCTGCGCGAGCGTGAGTTGGAATACGGTAAGGCTGGCTTT 38218
| || || || ||| |||||||| ||||| || | ||| || |||| ||||||
Sbjct 406 ATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTC 465
Query 38219 ACGCTACAGTTCATGCTTAACCCTAACCTTAGTGATGCCGAGAAGTACCCGCTGAGGCTT 38278
| |||||||||||||| ||||| |||||||| || ||||||||||||| ||| |||
Sbjct 466 GCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTG 525
Query 38279 CGTGA 38283
|||||
Sbjct 526 CGTGA 530
>seq515320
Length=237
Score = 105 bits (116), Expect = 2e-18
Identities = 129/175 (74%), Gaps = 1/175 (1%)
Strand=Plus/Plus
Query 13020 CTACGTGGTTCTGGCGCACTACGCCAACTATCTGATACTATTATTGCCCTTGAGCGTAAT 13079
|| |||||||| || || | ||||| || |||||| |||| ||| ||||| | |||
Sbjct 16 CTTCGTGGTTCAGGTTCAATTGCTCAACTCTCAGATACTGTTATAGCCTTTGAGAGGAAT 75
Query 13080 CAGCAAGGCGATATGCCTAACCTTGTCCTCGTTCGTATTCTCAAGTGCCGCTTTACTGGT 13139
|||||||| | |||||| ||| | | | || | ||||| |||||||| |||
Sbjct 76 CAGCAAGGGAGCAGTCCTAACAAGGTCTTGATAAGAATCTTAAAGTGTCGCTTTACAGGT 135
Query 13140 G-ATACTGGTATCGCTGGCTACATGGAATACAACAAGGAAACCGGATGGCTTGAA 13193
| | |||||||| || |||||| || | ||||| ||||||| ||||||||||||
Sbjct 136 GAAAACTGGTATAGCAGGCTACTTGAATTACAATCAGGAAACTGGATGGCTTGAA 190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126880053836676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |