Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq46432 113 5e-20 >seq46432 Length=4128 Score = 113 bits (124), Expect = 5e-20 Identities = 192/273 (70%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 83126 CCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGA 83185 || |||| || | || |||||||||||||||||||||||||||||| | ||| || || Sbjct 1488 CCATCAGGCCCGATCAGGAACTTCTCGAAGTTCCAGGCCACGTCGTTTCTGCAGACCGGG 1547 Query 83186 GACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGC 83245 |||| ||||| ||||||| | | || | | | |||||||| || | || Sbjct 1548 CTCCAGAGGATGAGTCTGGGGTCGTTGATCAGGGCGGTGGGCTCGTCGCT-GGGGAAGG- 1605 Query 83246 AGGGCCTCTCGT--AGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCA 83301 | || |||| | ||||| |||| || ||||| || |||| ||||| || || Sbjct 1606 GGAGCTTCTCCTTCAGGAACACGAACAGAGGATGAGCGTCCTT--CCCGTTCACATCCAC 1663 Query 83302 CTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGA 83361 ||||| | |||| ||| || |||||||| ||||| ||||| |||| | |||||| || Sbjct 1664 CTTCTGCAGGAGCTGAAACTTGGGCTCGAAACCGTTTCCAGGGCGGAGATACTTCAGAGA 1723 Query 83362 AGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 ||| ||| || |||| | | ||| ||||| Sbjct 1724 CTGCAGGATTTCATCATTGTTGCAGTTCTCCTG 1756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604797750800080