Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_002167.1
Length=39732
Score E
Sequences producing significant alignments: (Bits) Value
seq445849 89.7 1e-13
>seq445849
Length=1010
Score = 89.7 bits (98), Expect = 1e-13
Identities = 143/203 (70%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 23975 ACCTTCAACAAGAACACTACGGTAGTAATCCGCTTGCGC-TCCCGGCTTGGCAAATACAA 24033
|||||||||||| | ||||| ||||| ||||||| | |||||| ||| | ||
Sbjct 332 ACCTTCAACAAGTGCCGATCGGTAAAAATCCACTTGCGCCTGTTGGCTTGCGAAA-ATAA 274
Query 24034 CGGCGCTGTAGTTTGTCCATTCTTTCTTTTTTGTCTGGCGATCGTAATGCTGAACGCCAG 24093
|||| |||||||||||||||||| | ||||||| ||| || |||| ||||| ||
Sbjct 273 CGGCCTCGTAGTTTGTCCATTCTTTTTGCTTTGTCTCGCGGTCATAATATTGAACACCTA 214
Query 24094 CACGGATGTTGAATCCGATATTTTCCCCGGCCTGAAACTCTCTTGCGGGCTTGTTTAGTC 24153
|| | | || || || | || || || ||||| | | |||| | ||||||| |
Sbjct 213 AGCGAACGCCAAAACCTGTACTGTCGCCAGCTTGAAATTGTGTTGCTGCTTTGTTTAATT 154
Query 24154 TTACAGTAATCGAATGTGCCATT 24176
| | || | ||||||||||||
Sbjct 153 TACCCGTTACTGAATGTGCCATT 131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126228147497256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |