Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq445849 89.7 1e-13 >seq445849 Length=1010 Score = 89.7 bits (98), Expect = 1e-13 Identities = 143/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 23975 ACCTTCAACAAGAACACTACGGTAGTAATCCGCTTGCGC-TCCCGGCTTGGCAAATACAA 24033 |||||||||||| | ||||| ||||| ||||||| | |||||| ||| | || Sbjct 332 ACCTTCAACAAGTGCCGATCGGTAAAAATCCACTTGCGCCTGTTGGCTTGCGAAA-ATAA 274 Query 24034 CGGCGCTGTAGTTTGTCCATTCTTTCTTTTTTGTCTGGCGATCGTAATGCTGAACGCCAG 24093 |||| |||||||||||||||||| | ||||||| ||| || |||| ||||| || Sbjct 273 CGGCCTCGTAGTTTGTCCATTCTTTTTGCTTTGTCTCGCGGTCATAATATTGAACACCTA 214 Query 24094 CACGGATGTTGAATCCGATATTTTCCCCGGCCTGAAACTCTCTTGCGGGCTTGTTTAGTC 24153 || | | || || || | || || || ||||| | | |||| | ||||||| | Sbjct 213 AGCGAACGCCAAAACCTGTACTGTCGCCAGCTTGAAATTGTGTTGCTGCTTTGTTTAATT 154 Query 24154 TTACAGTAATCGAATGTGCCATT 24176 | | || | |||||||||||| Sbjct 153 TACCCGTTACTGAATGTGCCATT 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126228147497256