Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq76095 98.7 1e-15
seq331091 95.1 1e-14
seq150316 95.1 1e-14
seq469902 93.3 5e-14
seq58530 93.3 5e-14
seq64090 91.5 2e-13
seq436036 89.7 6e-13
seq82592 89.7 6e-13
seq76091 89.7 6e-13
seq59154 89.7 6e-13
seq54007 89.7 6e-13
seq34806 89.7 6e-13
seq34101 89.7 6e-13
seq436035 87.8 2e-12
seq393455 87.8 2e-12
seq218065 87.8 2e-12
seq218064 87.8 2e-12
seq76094 87.8 2e-12
seq76093 87.8 2e-12
seq76092 87.8 2e-12
seq3195 87.8 2e-12
seq34643 86.0 7e-12
>seq76095
Length=1076
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
|| |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 440 ATATTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 381
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 380 CACTATACTAACGAGGA 364
>seq331091
Length=722
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 333 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 392
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 393 TACTAACGAGGA 404
>seq150316
Length=2093
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 159 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 100
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 99 TACTAACGAGGA 88
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 471 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 412
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 411 TACTAACGAGGA 400
>seq469902
Length=392
Score = 93.3 bits (102), Expect = 5e-14
Identities = 74/89 (83%), Gaps = 4/89 (4%)
Strand=Plus/Minus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |
Sbjct 309 ATTGTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATC 250
Query 60121 CACTATACTACCGAGGATTGAATATATAA 60149
|||||||||| |||| ||||||||||
Sbjct 249 CACTATACTAACGAG----GAATATATAA 225
>seq58530
Length=1305
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
|||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 928 TTTTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 987
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 988 ACTATACTAACGAGGA 1003
Score = 89.7 bits (98), Expect = 6e-13
Identities = 74/90 (82%), Gaps = 4/90 (4%)
Strand=Plus/Plus
Query 60052 TTATGAAAAA----TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGG 60107
|| ||||||| ||| |||| || | |||||| |||||| ||||||||||||||||||
Sbjct 91 TTTTGAAAAAGTTGTTTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGG 150
Query 60108 CGGACATACTCACCACTATACTACCGAGGA 60137
||| ||||| ||||||||||| ||||||
Sbjct 151 CGGGGATACTATCCACTATACTAACGAGGA 180
>seq64090
Length=4476
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||
Sbjct 4304 TTTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCA 4245
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 4244 CTATACTAACGAGGA 4230
>seq436036
Length=387
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |
Sbjct 160 ATTATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATC 219
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 220 CACTATACTAACGAGGA 236
>seq82592
Length=440
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 426 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 367
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 366 TACTAACGAGGA 355
>seq76091
Length=4161
Score = 89.7 bits (98), Expect = 6e-13
Identities = 72/86 (84%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114
|||| |||| |||| || | |||||| |||||| ||||||||||||||||||||| ||
Sbjct 2032 AAAAGTTTTACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 1973
Query 60115 ACTCACCACTATACTACCGAGGATTG 60140
||| ||||||||||| |||||| ||
Sbjct 1972 ACTATCCACTATACTAACGAGGAATG 1947
>seq59154
Length=441
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 196 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 137
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 136 TACTAACGAGGA 125
>seq54007
Length=449
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 353 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 412
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 413 TACTAACGAGGA 424
>seq34806
Length=528
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 423 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 482
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 483 TACTAACGAGGA 494
>seq34101
Length=6098
Score = 89.7 bits (98), Expect = 6e-13
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114
|||||| || |||| || | |||||| |||||| ||||||||||||||||||||| ||
Sbjct 208 AAAAATGTTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 149
Query 60115 ACTCACCACTATACTACCGAGGA 60137
||| ||||||||||| ||||||
Sbjct 148 ACTATCCACTATACTAACGAGGA 126
>seq436035
Length=388
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 164 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACT 223
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 224 ATACTAACGAGGA 236
>seq393455
Length=608
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 574 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 515
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 514 ACTATACTAACGAGGA 499
>seq218065
Length=875
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 47 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 106
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 107 ACTATACTAACGAGGA 122
>seq218064
Length=567
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 47 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 106
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 107 ACTATACTAACGAGGA 122
>seq76094
Length=3832
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 2605 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 2546
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 2545 ACTATACTAACGAGGA 2530
>seq76093
Length=5103
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| ||||||| | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 4087 TTTCCTCCTCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 4028
Query 60122 ACTATACTACCGAGGA 60137
|||||| || ||||||
Sbjct 4027 ACTATATTAACGAGGA 4012
>seq76092
Length=1005
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 913 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 854
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 853 ACTATACTAACGAGGA 838
>seq3195
Length=4083
Score = 87.8 bits (96), Expect = 2e-12
Identities = 70/84 (83%), Gaps = 3/84 (4%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
|||| |||| ||||| | | |||||| |||||| ||||||||||||||||||||| |
Sbjct 1121 AAAAGTTTTATCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1180
Query 60114 TACTCACCACTATACTACCGAGGA 60137
|||| ||||||||||| ||||||
Sbjct 1181 TACTATCCACTATACTAACGAGGA 1204
>seq34643
Length=745
Score = 86.0 bits (94), Expect = 7e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 587 CTCCCCGTC-GGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 645
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 646 TACTAACGAGGA 657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568061458844560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |