Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq76095 98.7 1e-15 seq331091 95.1 1e-14 seq150316 95.1 1e-14 seq469902 93.3 5e-14 seq58530 93.3 5e-14 seq64090 91.5 2e-13 seq436036 89.7 6e-13 seq82592 89.7 6e-13 seq76091 89.7 6e-13 seq59154 89.7 6e-13 seq54007 89.7 6e-13 seq34806 89.7 6e-13 seq34101 89.7 6e-13 seq436035 87.8 2e-12 seq393455 87.8 2e-12 seq218065 87.8 2e-12 seq218064 87.8 2e-12 seq76094 87.8 2e-12 seq76093 87.8 2e-12 seq76092 87.8 2e-12 seq3195 87.8 2e-12 seq34643 86.0 7e-12 >seq76095 Length=1076 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 || |||||| || | |||||| |||||| ||||||||||||||||||||| |||||||| Sbjct 440 ATATTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 381 Query 60121 CACTATACTACCGAGGA 60137 |||||||||| |||||| Sbjct 380 CACTATACTAACGAGGA 364 >seq331091 Length=722 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 333 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 392 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 393 TACTAACGAGGA 404 >seq150316 Length=2093 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 159 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 100 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 99 TACTAACGAGGA 88 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 471 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 412 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 411 TACTAACGAGGA 400 >seq469902 Length=392 Score = 93.3 bits (102), Expect = 5e-14 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 ||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| | Sbjct 309 ATTGTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATC 250 Query 60121 CACTATACTACCGAGGATTGAATATATAA 60149 |||||||||| |||| |||||||||| Sbjct 249 CACTATACTAACGAG----GAATATATAA 225 >seq58530 Length=1305 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 |||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 928 TTTTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 987 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 988 ACTATACTAACGAGGA 1003 Score = 89.7 bits (98), Expect = 6e-13 Identities = 74/90 (82%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 60052 TTATGAAAAA----TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGG 60107 || ||||||| ||| |||| || | |||||| |||||| |||||||||||||||||| Sbjct 91 TTTTGAAAAAGTTGTTTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGG 150 Query 60108 CGGACATACTCACCACTATACTACCGAGGA 60137 ||| ||||| ||||||||||| |||||| Sbjct 151 CGGGGATACTATCCACTATACTAACGAGGA 180 >seq64090 Length=4476 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 ||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 4304 TTTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCA 4245 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 4244 CTATACTAACGAGGA 4230 >seq436036 Length=387 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 ||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| | Sbjct 160 ATTATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATC 219 Query 60121 CACTATACTACCGAGGA 60137 |||||||||| |||||| Sbjct 220 CACTATACTAACGAGGA 236 >seq82592 Length=440 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 426 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 367 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 366 TACTAACGAGGA 355 >seq76091 Length=4161 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||| |||| |||| || | |||||| |||||| ||||||||||||||||||||| || Sbjct 2032 AAAAGTTTTACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 1973 Query 60115 ACTCACCACTATACTACCGAGGATTG 60140 ||| ||||||||||| |||||| || Sbjct 1972 ACTATCCACTATACTAACGAGGAATG 1947 >seq59154 Length=441 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 196 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 137 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 136 TACTAACGAGGA 125 >seq54007 Length=449 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 353 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 412 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 413 TACTAACGAGGA 424 >seq34806 Length=528 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 423 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 482 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 483 TACTAACGAGGA 494 >seq34101 Length=6098 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||||| || |||| || | |||||| |||||| ||||||||||||||||||||| || Sbjct 208 AAAAATGTTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 149 Query 60115 ACTCACCACTATACTACCGAGGA 60137 ||| ||||||||||| |||||| Sbjct 148 ACTATCCACTATACTAACGAGGA 126 >seq436035 Length=388 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 164 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACT 223 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 224 ATACTAACGAGGA 236 >seq393455 Length=608 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 574 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 515 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 514 ACTATACTAACGAGGA 499 >seq218065 Length=875 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 47 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 106 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 107 ACTATACTAACGAGGA 122 >seq218064 Length=567 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 47 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 106 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 107 ACTATACTAACGAGGA 122 >seq76094 Length=3832 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 2605 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 2546 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 2545 ACTATACTAACGAGGA 2530 >seq76093 Length=5103 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| ||||||| | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 4087 TTTCCTCCTCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 4028 Query 60122 ACTATACTACCGAGGA 60137 |||||| || |||||| Sbjct 4027 ACTATATTAACGAGGA 4012 >seq76092 Length=1005 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 913 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 854 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 853 ACTATACTAACGAGGA 838 >seq3195 Length=4083 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||| |||| ||||| | | |||||| |||||| ||||||||||||||||||||| | Sbjct 1121 AAAAGTTTTATCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1180 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| ||||||||||| |||||| Sbjct 1181 TACTATCCACTATACTAACGAGGA 1204 >seq34643 Length=745 Score = 86.0 bits (94), Expect = 7e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 587 CTCCCCGTC-GGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 645 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 646 TACTAACGAGGA 657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568061458844560