Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq496362 185 8e-42
>seq496362
Length=882
Score = 185 bits (204), Expect = 8e-42
Identities = 489/727 (67%), Gaps = 25/727 (3%)
Strand=Plus/Minus
Query 16043 TCGCATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAA 16102
||||| || | ||| | || | |||||| | ||||| |||| ||| || ||||||||
Sbjct 828 TCGCAACCTAGTTCTACTAAAAGTCTATCGGTTACAAACTCTAAATATTGCGTCATTAAA 769
Query 16103 T-CACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTAT 16161
| | || ||||| || ||||| | ||||| | || |||||| | ||| | | |||| ||
Sbjct 768 TTCGCA-TTCATACCAATTAAACTTACAGGAAGTGATTCTGTAATAAATTCTCTTTCGAT 710
Query 16162 ATTAACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTG 16221
|| | || ||||| || || ||| | | ||| | |||| |||||
Sbjct 709 GTTTAAGGCGTCAATAATAATGGTTCTGATTCTGTCTTTTGGCACTTTATTTACCAAGTG 650
Query 16222 ---TTTAAACATTATACAA-GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACT 16277
|| || || || || |||||||| || | |||||||| | | || || |
Sbjct 649 ATGTTGGTGCAA-ATGCACTGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATT 591
Query 16278 CGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAA 16337
||||||| ||||| | |||||||| | ||||||||||| | ||| || || | ||
Sbjct 590 CGTTTGAGAATGTCAATCCTGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAA 531
Query 16338 ATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACG 16397
| | ||| || ||||| || ||||| ||||| ||||| |||| ||||||||| || | |
Sbjct 530 AAGCACCTGAGAAGAAAATTCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAAG 471
Query 16398 TTCTAtttttactttctatccattttttagcccaatttgctttttgtttAACA-CAGTTC 16456
| | | | || ||||||| | ||||| | ||||| | ||| | | |||
Sbjct 470 ----AATCTGA--ATCAATCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAA 417
Query 16457 ATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCT--ATCTAAAATATAAGTAT 16514
| | |||| ||| || ||||||| ||||| |||| ||| | |||||| |
Sbjct 416 AAACT-TCTAATGCGTTGAATAAAT--CGGCTTTCTCTGCTTCGTCTTTTACATAAGTGT 360
Query 16515 CTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-A 16573
| |||| || |||| |||| |||||||| ||||| || || |||||||| |
Sbjct 359 CGATTAACAAGGAATACGTTTCGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGA 300
Query 16574 AAGCATCTAGCTTC-GGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTT 16632
||| || | ||||| | ||| ||| |||||| ||| |||| || | ||||| ||
Sbjct 299 AAGAATTTCGCTTCAGCATA-TTGCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATT 241
Query 16633 AACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGT- 16691
|| ||||| || ||| || ||||| || | |||||||| ||||| | || |||||
Sbjct 240 TACAATTCCGTCTGAAGCGGCGAAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTC 181
Query 16692 TATCTGAAAGTT-TTA-ACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGT 16749
| | | || || ||| |||||| ||||||| ||| ||||| | ||||| ||||
Sbjct 180 TTTATTCAACTTGTTATTCCAGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGT 121
Query 16750 CCAAAAA 16756
||| |||
Sbjct 120 CCAGAAA 114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 459473862737200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |