Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq418350 91.5 1e-14 seq509934 80.6 3e-11 >seq418350 Length=1140 Score = 91.5 bits (100), Expect = 1e-14 Identities = 113/154 (73%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 14534 AGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAG---AAGAAGGCAA 14590 ||||||||||||||||| ||||||||| ||||| ||||||||| | | | | ||| Sbjct 263 AGTAAAATGGTTTAACGAAGATAAAGGTTTTGGTTTTATCACTCCTGATAACGGCGGCGC 322 Query 14591 AGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAGG 14650 || |||||| ||| ||| ||||| || || || ||||| | || | |||||| Sbjct 323 TGACGTGTTCGTTCATTTCCGTTCAATCACTTCAGAAGGTTTCAAGACTCTAGCTGAAGG 382 Query 14651 TCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAA 14684 || |||||| ||||||||||| |||| ||| Sbjct 383 CCAGAAAGTTTCTTTTGATGTTGAGCAAGGCCAA 416 >seq509934 Length=681 Score = 80.6 bits (88), Expect = 3e-11 Identities = 147/212 (69%), Gaps = 10/212 (5%) Strand=Plus/Plus Query 14481 AAATGAGATTTACAATTTTGTCGAAAGGAAATAAATATTATGGCAAATGGAACAGTAAAA 14540 |||| ||| ||| | |||| | || || ||| ||||| || || | ||| || Sbjct 249 AAATCAGAATTATATTTTTCACCTAAAAAAGAGAATGTTATGAGTAAAGGTATAGTTAAG 308 Query 14541 TGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAG---GCAAAGATTTG 14597 ||||||||||| |||||||| || || ||||| ||| ||||||| | |||||||||| Sbjct 309 TGGTTTAACGCTGATAAAGGTTTCGGTTTTATTACTCCAGAAGACGGCAGCAAAGATTTA 368 Query 14598 TTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATC---ACTT--GATGAAGGTC 14652 || | || |||| ||| ||| ||| || |||| | |||| |||| |||| Sbjct 369 TTTGTACATCATTCAGAAATTCAAGCTGGCGG--TCAATACGCTACTTTGAATGACGGTC 426 Query 14653 AAAAAGTTGAATTTGATGTTGAAGAAGGTCAA 14684 || ||||| ||||| ||| ||||| ||| Sbjct 427 AAGCTGTTGAGTTTGAAGTTACCGAAGGACAA 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48159985402492