Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_002671.1
Length=15179
Score E
Sequences producing significant alignments: (Bits) Value
seq418350 91.5 1e-14
seq509934 80.6 3e-11
>seq418350
Length=1140
Score = 91.5 bits (100), Expect = 1e-14
Identities = 113/154 (73%), Gaps = 3/154 (2%)
Strand=Plus/Plus
Query 14534 AGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAG---AAGAAGGCAA 14590
||||||||||||||||| ||||||||| ||||| ||||||||| | | | | |||
Sbjct 263 AGTAAAATGGTTTAACGAAGATAAAGGTTTTGGTTTTATCACTCCTGATAACGGCGGCGC 322
Query 14591 AGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAGG 14650
|| |||||| ||| ||| ||||| || || || ||||| | || | ||||||
Sbjct 323 TGACGTGTTCGTTCATTTCCGTTCAATCACTTCAGAAGGTTTCAAGACTCTAGCTGAAGG 382
Query 14651 TCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAA 14684
|| |||||| ||||||||||| |||| |||
Sbjct 383 CCAGAAAGTTTCTTTTGATGTTGAGCAAGGCCAA 416
>seq509934
Length=681
Score = 80.6 bits (88), Expect = 3e-11
Identities = 147/212 (69%), Gaps = 10/212 (5%)
Strand=Plus/Plus
Query 14481 AAATGAGATTTACAATTTTGTCGAAAGGAAATAAATATTATGGCAAATGGAACAGTAAAA 14540
|||| ||| ||| | |||| | || || ||| ||||| || || | ||| ||
Sbjct 249 AAATCAGAATTATATTTTTCACCTAAAAAAGAGAATGTTATGAGTAAAGGTATAGTTAAG 308
Query 14541 TGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAG---GCAAAGATTTG 14597
||||||||||| |||||||| || || ||||| ||| ||||||| | ||||||||||
Sbjct 309 TGGTTTAACGCTGATAAAGGTTTCGGTTTTATTACTCCAGAAGACGGCAGCAAAGATTTA 368
Query 14598 TTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATC---ACTT--GATGAAGGTC 14652
|| | || |||| ||| ||| ||| || |||| | |||| |||| ||||
Sbjct 369 TTTGTACATCATTCAGAAATTCAAGCTGGCGG--TCAATACGCTACTTTGAATGACGGTC 426
Query 14653 AAAAAGTTGAATTTGATGTTGAAGAAGGTCAA 14684
|| ||||| ||||| ||| ||||| |||
Sbjct 427 AAGCTGTTGAGTTTGAAGTTACCGAAGGACAA 458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 48159985402492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |