Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 127 4e-24
>seq44246
Length=4029
Score = 127 bits (140), Expect = 4e-24
Identities = 397/612 (65%), Gaps = 7/612 (1%)
Strand=Plus/Plus
Query 248799 CTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCT 248858
|| || || |||||| ||| | ||||| | ||||| ||||||||| ||| || ||
Sbjct 258 CTTCGACAGAGATTTCTCCTACAACTTCTTCGGCTTCAAGACGCTGGAGCGATCCTACCT 317
Query 248859 CCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGT 248918
|| || || | ||||| | | ||| || ||||||||| | ||| | ||| | ||
Sbjct 318 GCTGAAGATCAACGGCAAAGTGGCGGAGCGGCCGCAGCACATGCTCATGAGGGTGTCGGT 377
Query 248919 CGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACC--GGAATGAGTGAA 248976
||| || |||||| || || || || ||||||| |||| | | | | |||
Sbjct 378 CGGAATCCACAAGACGGATATCGACGCCGCCATCGAGACCTACAACCTGCTCTCGGAGAA 437
Query 248977 CGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTG 249036
||| | || || ||| | || |||||||||||||| || ||| | ||||||
Sbjct 438 G--TGGTTCACCCACGCCTCCCCCACGCTCTTCAACGCAGGAACCAACCGGCCTCAGCTC 495
Query 249037 AGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTT 249096
| ||||| || || ||||| | |||||| |||| ||||| || ||||||||
Sbjct 496 TCCAGCTGCTTCCTGCTCACCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTG 555
Query 249097 AAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATC 249156
|| ||| || || || || | || || ||||||||| | ||||| | ||||
Sbjct 556 AAGCAGTGTGCACTCATCTCCAAGTCGGCAGGAGGAATCGGTGTGGCCGTCAGCTGCATC 615
Query 249157 CGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTC 249216
||| | | || |||||| || || || || | | || | || ||| |
Sbjct 616 CGATCCACCGGGAGCTACATCGCCGGCACCAACGGCAACTCCAACGGGCTGGTCCCCATG 675
Query 249217 CTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGG 249273
|| | || | ||| || | | || |||||| ||| | ||| ||
Sbjct 676 CTGAGGGTCTACAACAACACAGCACGCTATGTCGACCAGGGCGGCAACAAGCGACCCGGC 735
Query 249274 TCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAA 249333
| ||||||||||| |||| ||||||| || | || || |||||||| ||||
Sbjct 736 GCCTTCGCCATGTACCTGGAGCCGTGGCACTTTGACGTGTTCGACTTCCTGGAGCTGAAG 795
Query 249334 AAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCC 249393
||||||| || || ||| |||||| | || |||||||||||| ||||| || ||
Sbjct 796 AAGAACACGGGGAAGGAGGAGCAGAGAGCCAGAGATCTCTTCTACGGCTTGTGGATCCCC 855
Query 249394 GACTTGTTCATG 249405
||| ||||||||
Sbjct 856 GACCTGTTCATG 867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1066536736868736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |